TDA
From MaRDI portal
Description
Tools for Topological Data Analysis. The package focuses on statistical analysis of persistent homology and density clustering. For that, this package provides an R interface for the efficient algorithms of the C++ libraries 'GUDHI' <https://project.inria.fr/gudhi/software/>, 'Dionysus' <https://www.mrzv.org/software/dionysus/>, and 'PHAT' <https://bitbucket.org/phat-code/phat/>. This package also implements methods from Fasy et al. (2014) <doi:10.1214/14-AOS1252> and Chazal et al. (2015) <doi:10.20382/jocg.v6i2a8> for analyzing the statistical significance of persistent homology features.
Cited in
(94)- etree
- KnotPlot
- orderkdelaunay
- rhomboidtiling
- lookout
- ClusterGAN
- PersistenceImages
- PersistenceCurves
- kernelTDA
- DioDe
- HERMES
- TADD
- Signal classification with a point process distance on the space of persistence diagrams
- On the topological data analysis extensions and comparisons
- DMOL3
- A primer on persistent homology of finite metric spaces
- HERMES: persistent spectral graph software
- Phenotyping OSA: a time series analysis using fuzzy clustering and persistent homology
- Gudhi
- Perseus
- javaPlex
- PHAT
- A simplified algorithm for identifying abnormal changes in dynamic networks
- Biomolecular topology: modelling and analysis
- parest_dae
- Topological data analysis for the energy and stability of endohedral metallofullerenes
- Dionysus
- Topological recognition of critical transitions in time series of cryptocurrencies
- Topological data analysis of financial time series: landscapes of crashes
- `Holey' niche! finding holes in niche hypervolumes using persistence homology
- Aspects of topological approaches for data science
- Testing goodness of fit for point processes via topological data analysis
- jPlex
- Atom-specific persistent homology and its application to protein flexibility analysis
- A \(k\)-points-based distance for robust geometric inference
- Topological features of multivariate distributions: dependency on the covariance matrix
- Challenges in topological object data analysis
- Topological data analysis approaches to uncovering the timing of ring structure onset in filamentous networks
- jHoles
- TDAmapper
- mCSM
- SW1PerS
- Gprof
- CellProfiler
- MRtrix
- Geometric metrics for topological representations
- Persistence Landscape
- pstca
- Persistence Terrace for Topological Inference of Point Cloud Data
- geozoo
- neuRosim
- multimode
- DeBaCl
- CompPD
- Eirene
- neural ideal
- RIVET
- Ripser
- tthresh
- SimBa
- lsbs
- DIPHA
- CliqueTop
- TDAstats
- Scikit-tda
- CTL
- pyuvdata
- Ripser.py
- dimRed
- STRIDE
- Robust topological inference: distance to a measure and kernel distance
- SiZer
- GET
- datasetsICR
- tda-tools
- Supervised learning with indefinite topological Kernels
- The persistence landscape and some of its properties
- scientific article; zbMATH DE number 7306903 (Why is no real title available?)
- AFLOW-SYM
- NADE
- Nonparametric estimation of probability density functions of random persistence diagrams
- RDRToolbox
- MEDYAN
- SECT
- Kepler Mapper
- Points
- gfanInterface
- pflamelet
- TopologyNet
- AGL-Score
- ashapesampler
- RPointCloud
- \textsc{Phat} -- persistent homology algorithms toolbox
- A persistence landscapes toolbox for topological statistics
This page was built for software: TDA
