Use of SVD-based probit transformation in clustering gene expression profiles

DOI10.1016/J.CSDA.2007.01.022MaRDI QIDQ1020741zbMATH OpenOpenAlexFDO

Authors Faming Liang

Publication date 2 June 2009

Published in Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.csda.2007.01.022

zbMATH Keywords

gene expression profilesmodel-based clusteringprobit transformationsingular value decomposition

Mathematics Subject Classification ID

Factor analysis and principal components; correspondence analysis (62H25) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10)

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Cites work

• An improvement of the NEC criterion for assessing the number of clusters in a mixture model
• Applied nonparametric statistical methods.
• scientific article; zbMATH DE number 3942813 (Why is no real title available?)
• scientific article; zbMATH DE number 51361 (Why is no real title available?)
• scientific article; zbMATH DE number 3567782 (Why is no real title available?)
• scientific article; zbMATH DE number 1750190 (Why is no real title available?)
• Model-Based Clustering, Discriminant Analysis, and Density Estimation
• Model-Based Gaussian and Non-Gaussian Clustering
• On Using Principal Components Before Separating a Mixture of Two Multivariate Normal Distributions
• Principal component analysis.
• Tight Clustering: A Resampling‐Based Approach for Identifying Stable and Tight Patterns in Data

Cited in

(5)

• Polarization of forecast densities: a new approach to time series classification
• An exposition of multivariate analysis with the singular value decomposition in R
• A hypothesis test using bias-adjusted AR estimators for classifying time series in small samples
• Adaptive clustering for time series: application for identifying cell cycle expressed genes
• Editorial: Statistical genetics \& statistical genomics: where biology, epistemology, statistics, and computation collide

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