Statistical inference for simultaneous clustering of gene expression data

DOI10.1016/S0025-5564(01)00116-XMaRDI QIDQ1602591zbMATH OpenOpenAlexWikidataFDO

Authors Katherine Pollard, Mark J. Van der Laan

Publication date 23 June 2002

Published in Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/s0025-5564(01)00116-x, https://biostats.bepress.com/cgi/viewcontent.cgi?article=1015&context=ucbbiostat

zbMATH Keywords

bootstrapclusteringdrug dicoverygene expression

Mathematics Subject Classification ID

Nonparametric statistical resampling methods (62G09) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10)

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Cites work

• Bootstrapping general empirical measures
• Finding Groups in Data
• Gene expression analysis with the parametric bootstrap
• Model-Based Clustering, Discriminant Analysis, and Density Estimation

Cited in

(19)

• Use of SVD-based probit transformation in clustering gene expression profiles
• Two-mode multi-partitioning
• Improved biclustering of microarray data demonstrated through systematic performance tests
• A new algorithm for hybrid hierarchical clustering with visualization and the bootstrap
• Problems in gene clustering based on gene expression data
• On a resampling approach for tests on the number of clusters with mixture model-based clustering of tissue samples
• Clustering gene expression data using a posterior split-merge-birth procedure
• Some statistical properties of gene expression clustering for array data
• scientific article; zbMATH DE number 1750183 (Why is no real title available?)
• scientific article; zbMATH DE number 1750189 (Why is no real title available?)
• A Bayesian clustering approach for detecting gene-gene interactions in high-dimensional genotype data
• Two-mode clustering methods: astructuredoverview
• Clustering microarray data using model-based double \(K\)-means
• A Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification
• State-of-the-art of Cluster Analysis of Gene Expression Data
• scientific article; zbMATH DE number 5274665 (Why is no real title available?)
• Gene expression analysis with the parametric bootstrap
• Gamma-based clustering via ordered means with application to gene-expression analysis
• Classification by integrating plant stress response gene expression data with biological knowledge

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Uses Software

• clusfind

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