A multiple time interval finite state projection algorithm for the solution to the chemical master equation (Q2456722): Difference between revisions
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Property / cites work: Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems / rank | |||
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Property / cites work: Accuracy limitations and the measurement of errors in the stochastic simulation of chemically reacting systems / rank | |||
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Latest revision as of 11:23, 27 June 2024
scientific article
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English | A multiple time interval finite state projection algorithm for the solution to the chemical master equation |
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A multiple time interval finite state projection algorithm for the solution to the chemical master equation (English)
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19 October 2007
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This paper is concentrated to one computational difficulty that arises when system trajectories slowly drift over regions of the configuration space during long time intervals. A new approach for choosing and expanding the projection for the original finite state projection algorithm is presented. The authors introduce an approach to automatically choosing and expanding the projection necessary to achieve a desired accuracy and then illustrate this algorithm on a simplified model from the field of systems biology.
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chemical master equation
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stochastic gene regulatory networks
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Markov processes
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