Dinucleotide circular codes

DOI10.1155/2013/538631zbMath1269.92038OpenAlexW2030555609WikidataQ58997416 ScholiaQ58997416MaRDI QIDQ355961

Giuseppe Pirillo, Christian J. Michel

Publication date: 25 July 2013

Published in: ISRN Biomathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1155/2013/538631

Mathematics Subject Classification ID

Combinatorics on words (68R15) Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08) Prefix, length-variable, comma-free codes (94A45)

Related Items (6)

Maximal dinucleotide comma-free codes ⋮ On the hierarchy of trinucleotide \(n\)-circular codes and their corresponding amino acids ⋮ n -Nucleotide circular codes in graph theory ⋮ Diletter circular codes over finite alphabets ⋮ Dinucleotide circular codes and bijective transformations ⋮ Mixed circular codes

Cites Work

• A classification of 20-trinucleotide circular codes
• Strong trinucleotide circular codes
• Varieties of comma-free codes
• A relation between trinucleotide comma-free codes and trinucleotide circular codes
• On the bound of the synchronization delay of a local automaton
• Generating functions of circular codes
• Circular codes in archaeal genomes
• Mutually symmetric and complementary triplets: differences in their use distinguish systematically between coding and non-coding genomic sequences
• Identification of all trinucleotide circular codes
• Circular codes revisited: a statistical approach
• Identification of circular codes in bacterial genomes and their use in a factorization method for retrieving the reading frames of genes
• Comma-Free Codes
• A hierarchy for circular codes
• Circular codes and synchronization
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