Adaptive mesh refinement for stochastic reaction-diffusion processes

DOI10.1016/J.JCP.2010.08.035zbMath1205.65020OpenAlexW2072969946WikidataQ59937889 ScholiaQ59937889MaRDI QIDQ613973

Basil Bayati, Philippe Chatelain, Petros Koumoutsakos

Publication date: 23 December 2010

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jcp.2010.08.035

zbMATH Keywords

AMRalgorithmconvergencenumerical examplesadaptive mesh refinementstochastic simulationsreaction-diffusionFisher-Kolmogorov equationsGray-Scottmesoscopic stochastic simulationsreaction-diffusion processes

Mathematics Subject Classification ID

Diffusion processes (60J60) Stochastic partial differential equations (aspects of stochastic analysis) (60H15) PDEs with randomness, stochastic partial differential equations (35R60) Computational methods for stochastic equations (aspects of stochastic analysis) (60H35) Numerical solutions to stochastic differential and integral equations (65C30) Mesh generation, refinement, and adaptive methods for the numerical solution of initial value and initial-boundary value problems involving PDEs (65M50) Boundary value problems for PDEs of mixed type (35M12)

Related Items (7)

Multiscale Simulation of Stochastic Reaction-Diffusion Networks ⋮ A first-passage kinetic Monte Carlo method for reaction-drift-diffusion processes ⋮ Isotropic finite volume discretization ⋮ Multiscale stochastic simulations of chemical reactions with regulated scale separation ⋮ PARTICLE SIMULATIONS OF MORPHOGENESIS ⋮ Spatial stochastic intracellular kinetics: a review of modelling approaches ⋮ \(S\)-leaping: an adaptive, accelerated stochastic simulation algorithm, bridging \(\tau\)-leaping and \(R\)-leaping

Uses Software

• Overture

Cites Work

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