Robbins, empirical Bayes and microarrays

DOI10.1214/aos/1051027871zbMath1038.62099MaRDI QIDQ1429308

Efron, Bradley

Publication date: 18 May 2004

Published in: The Annals of Statistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1214/aos/1051027871

zbMATH Keywords

simultaneous inference; false discovery rate; Stein estimation; \(q\)-value; missing species

Mathematics Subject Classification ID

62P10: Applications of statistics to biology and medical sciences; meta analysis

01A70: Biographies, obituaries, personalia, bibliographies

92C40: Biochemistry, molecular biology

62C12: Empirical decision procedures; empirical Bayes procedures

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Cites Work

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• The control of the false discovery rate in multiple testing under dependency.
• Significance analysis of microarrays applied to the ionizing radiation response
• THE NUMBER OF NEW SPECIES, AND THE INCREASE IN POPULATION COVERAGE, WHEN A SAMPLE IS INCREASED
• Did Shakespeare write a newly-discovered poem?
• Data Analysis Using Stein's Estimator and its Generalizations
• Empirical Bayes Analysis of a Microarray Experiment
• Operating Characteristics and Extensions of the False Discovery Rate Procedure
• Stein's Estimation Rule and Its Competitors--An Empirical Bayes Approach
• The Empirical Bayes Approach to Statistical Decision Problems
• Asymptotic Solutions of the Compound Decision Problem for Two Completely Specified Distributions