Estimation of cell proliferation dynamics using CFSE data

DOI10.1007/s11538-010-9524-5zbMath1209.92012WikidataQ33535997 ScholiaQ33535997MaRDI QIDQ2430572

Gennadii A. Bocharov, Dirk Roose, Karyn L. Sutton, W. Clayton Thompson, Harvey Thomas Banks

Publication date: 8 April 2011

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc2911498

zbMATH Keywords

inverse problems; partial differential equations; cell proliferation; CFSE; label structured population dynamics

Mathematics Subject Classification ID

62P10: Applications of statistics to biology and medical sciences; meta analysis

37N25: Dynamical systems in biology

35Q92: PDEs in connection with biology, chemistry and other natural sciences

92C37: Cell biology

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Cites Work

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• Estimating lymphocyte division and death rates from CFSE data
• Standard error computations for uncertainty quantification in inverse problems: asymptotic theory vs. bootstrapping
• Statistical methods for model comparison in parameter estimation problems for distributed systems
• Distributed parameter identification for a label-structured cell population dynamics model using CFSE histogram time-series data
• A comparison of approximation methods for the estimation of probability distributions on parameters
• Computational analysis of CFSE proliferation assay
• Interpreting CFSE obtained division histories of B cells in vitro with Smith-Martin and cyton type models
• A nonlinear structured population model of tumor growth with quiescence
• Modelling and mathematical problems related to tumor evolution and its interaction with the immune system
• Incorporation of variability into the modeling of viral delays in HIV infection dynamics
• An Inverse Problem Statistical Methodology Summary
• Estimation of growth rate distributions in size structured population models
• Solving Hyperbolic PDEs in MATLAB