coda

Output Analysis and Diagnostics for MCMC

Nicky Best, Arni Magnusson, Russell Almond, Kate Cowles, Douglas Bates, Karen Vines, Martyn Plummer, Deepayan Sarkar

Last update: 31 January 2024

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 0.19-4, 0.4-5, 0.4-6, 0.4-7, 0.5-1, 0.5-3, 0.5-5, 0.5-6, 0.5-7, 0.5-8, 0.5-10, 0.5-11, 0.5-12, 0.5-14, 0.5-15, 0.6-1, 0.6-2, 0.7-1, 0.7-2, 0.8-1, 0.8-2, 0.8-3, 0.9-1, 0.9-2, 0.9-4, 0.9-5, 0.10-1, 0.10-2, 0.10-3, 0.10-4, 0.10-5, 0.10-6, 0.10-7, 0.11-1, 0.11-2, 0.11-3, 0.12-1, 0.13-1, 0.13-2, 0.13-3, 0.13-4, 0.13-5, 0.14-2, 0.14-4, 0.14-5, 0.14-6, 0.14-7, 0.15-1, 0.15-2, 0.16-1, 0.17-1, 0.18-1, 0.19-1, 0.19-2, 0.19-3, 0.19-4.1

Description

Provides functions for summarizing and plotting theoutput from Markov Chain Monte Carlo (MCMC) simulations, aswell as diagnostic tests of convergence to the equilibriumdistribution of the Markov chain.

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