A Bayesian State-Space Approach to Mapping Directional Brain Networks
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Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian problems; characterization of Bayes procedures (62C10) Neural biology (92C20) Neural networks for/in biological studies, artificial life and related topics (92B20) Computational methods for problems pertaining to biology (92-08)
Abstract: The human brain is a directional network system of brain regions involving directional connectivity. Seizures are a directional network phenomenon as abnormal neuronal activities start from a seizure onset zone (SOZ) and propagate to otherwise healthy regions. To localize the SOZ of an epileptic patient, clinicians use iEEG to record the patient's intracranial brain activity in many small regions. iEEG data are high-dimensional multivariate time series. We build a state-space multivariate autoregression (SSMAR) for iEEG data to model the underlying directional brain network. To produce scientifically interpretable network results, we incorporate into the SSMAR the scientific knowledge that the underlying brain network tends to have a cluster structure. Specifically, we assign to the SSMAR parameters a stochastic-blockmodel-motivated prior, which reflects the cluster structure. We develop a Bayesian framework to estimate the SSMAR, infer directional connections, and identify clusters for the unobserved network edges. The new method is robust to violations of model assumptions and outperforms existing network methods. By applying the new method to an epileptic patient's iEEG data, we reveal seizure initiation and propagation in the patient's brain network. Our method can also accurately localize the SOZ. Overall, this paper provides a tool to study the human brain network.
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Cited in
(7)- A probabilistic approach for lateralization of seizure onset zone in drug-resistant epilepsy with bilateral cerebral pathology
- A generalized Bayesian stochastic block model for microbiome community detection
- Nonparametric multi-level clustering of human epilepsy seizures
- Information flow among neural networks with Bayesian estimation
- Bayesian inference of a directional brain network model for intracranial EEG data
- A variational Bayesian approach to identifying whole-brain directed networks with fMRI data
- Identifying temporal pathways using biomarkers in the presence of latent non-Gaussian components
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