Spatial Bayesian variable selection and grouping for high-dimensional scalar-on-image regression
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Abstract: Multi-subject functional magnetic resonance imaging (fMRI) data has been increasingly used to study the population-wide relationship between human brain activity and individual biological or behavioral traits. A common method is to regress the scalar individual response on imaging predictors, known as a scalar-on-image (SI) regression. Analysis and computation of such massive and noisy data with complex spatio-temporal correlation structure is challenging. In this article, motivated by a psychological study on human affective feelings using fMRI, we propose a joint Ising and Dirichlet Process (Ising-DP) prior within the framework of Bayesian stochastic search variable selection for selecting brain voxels in high-dimensional SI regressions. The Ising component of the prior makes use of the spatial information between voxels, and the DP component groups the coefficients of the large number of voxels to a small set of values and thus greatly reduces the posterior computational burden. To address the phase transition phenomenon of the Ising prior, we propose a new analytic approach to derive bounds for the hyperparameters, illustrated on 2- and 3-dimensional lattices. The proposed method is compared with several alternative methods via simulations, and is applied to the fMRI data collected from the KLIFF hand-holding experiment.
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Cites work
- scientific article; zbMATH DE number 1034042 (Why is no real title available?)
- scientific article; zbMATH DE number 774881 (Why is no real title available?)
- A Bayesian analysis of some nonparametric problems
- Analysis of multiple sclerosis lesions via spatially varying coefficients
- Approximate Bayes factors and accounting for model uncertainty in generalised linear models
- Bayesian Selection and Clustering of Polymorphisms in Functionally Related Genes
- Bayesian Variable Selection in Clustering High-Dimensional Data
- Bayesian Variable Selection in Linear Regression
- Bayesian spatiotemporal inference in functional magnetic resonance imaging
- Bayesian variable selection in structured high-dimensional covariate spaces with applications in genomics
- Gibbs Sampling Methods for Stick-Breaking Priors
- Incorporating biological information into linear models: a Bayesian approach to the selection of pathways and genes
- Inference from iterative simulation using multiple sequences
- Markov chain Monte Carlo in approximate Dirichlet and beta two-parameter process hierarchical models
- Meta analysis of functional neuroimaging data via Bayesian spatial point processes
- Meta-analysis of functional neuroimaging data using Bayesian nonparametric binary regression
- Mixtures of Dirichlet processes with applications to Bayesian nonparametric problems
- Modeling the spatial and temporal dependence in fMRI data
- Nonparametric regression using Bayesian variable selection
- Prior distributions on spaces of probability measures
- Spatial Bayesian Variable Selection With Application to Functional Magnetic Resonance Imaging
- Spatial Bayesian variable selection and grouping for high-dimensional scalar-on-image regression
- Spatiotemporal Models for Region of Interest Analyses of Functional Neuroimaging Data
- The Bayesian Lasso
- Variable selection in clustering via Dirichlet process mixture models
- Wavelet-domain regression and predictive inference in psychiatric neuroimaging
Cited in
(29)- Bayesian functional linear regression with sparse step functions
- Bayesian Nonparametric Scalar-on-Image Regression via Potts-Gibbs Random Partition Models
- Nonparametric quantile scalar-on-image regression
- A statistical pipeline for identifying physical features that differentiate classes of 3D shapes
- Robust High-Dimensional Regression with Coefficient Thresholding and Its Application to Imaging Data Analysis
- Classification of brain activation via spatial Bayesian variable selection in fMRI regression
- Spatial Shrinkage Via the Product Independent Gaussian Process Prior
- Bayesian method for causal inference in spatially-correlated multivariate time series
- Discussion to: Bayesian graphical models for modern biological applications by Y. Ni, V. Baladandayuthapani, M. Vannucci and F.C. Stingo
- A Bayesian State-Space Approach to Mapping Directional Brain Networks
- A Bayesian nonparametric spiked process prior for dynamic model selection
- A spatial Bayesian latent factor model for image‐on‐image regression
- A spatiotemporal nonparametric Bayesian model of multi-subject fMRI data
- Spatial Bayesian Variable Selection With Application to Functional Magnetic Resonance Imaging
- Bayesian network mediation analysis with application to the brain functional connectome
- Multivariate factorizable expectile regression with application to fMRI data
- Spatial Bayesian variable selection and grouping for high-dimensional scalar-on-image regression
- Spatial Signal Detection Using Continuous Shrinkage Priors
- More nonparametric Bayesian inference in applications
- Bayesian network marker selection via the thresholded graph Laplacian Gaussian prior
- Bayesian Interaction Selection Model for Multimodal Neuroimaging Data Analysis
- Bayesian hierarchical models for high-dimensional mediation analysis with coordinated selection of correlated mediators
- Bayesian Nonlinear Tensor Regression with Functional Fused Elastic Net Prior
- Incorporating prior information with fused sparse group Lasso: application to prediction of clinical measures from neuroimages
- Prior Knowledge Guided Ultra-High Dimensional Variable Screening With Application to Neuroimaging Data
- Nonstationary Gaussian Process Discriminant Analysis With Variable Selection for High-Dimensional Functional Data
- Individualized multilayer tensor learning with an application in imaging analysis
- Scalar on network regression via boosting
- An improved tensor regression model via location smoothing
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