An Analytical Method for Multiclass Molecular Cancer Classification

DOI10.1137/S0036144502411986MaRDI QIDQ4442844zbMATH OpenFDO

Authors Ryan Rifkin, Sayan Mukherjee, Sridhar Ramaswamy, Chen-Hsiang Yeang, Michael Angelo, Michael Reich, T. Poggio, Todd Golub, Jill P. Mesirov, Pablo Tamayo, Eric S. Lander

Publication date 20 January 2004

Published in SIAM Review (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1137/S0036144502411986

zbMATH Keywords

cancercomputational biologymolecular classificationmulticlass classificationpattern recognitionsupport vector machinetumor

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Medical applications (general) (92C50)

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Cited in

(28)

• Multiclass sparse logistic regression for classification of multiple cancer types using gene expression data
• Multiclass cancer classification by support vector machines with class-wise optimized genes and probability estimates
• Prediction of esophageal cancer using demographic, lifestyle, patient history, and basic clinical tests
• Computational methods for recognition of cancer protein markers in saliva
• Tumor classification using phylogenetic methods on expression data
• NIM: a node influence based method for cancer classification
• Consensus analysis of multiple classifiers using non-repetitive variables: diagnostic application to microarray gene expression data
• Cancer classification using ensemble of neural networks with multiple significant gene subsets
• Classification of multi class dataset using wavelet power spectrum
• Reducing multiclass cancer classification to binary by output coding and SVM
• Matched gene selection and committee classifier for molecular classification of heterogeneous diseases
• Comparison of Support Vector Machines to Other Classifiers Using Gene Expression Data
• The effect of population contexts on classifier performance
• Artificial Intelligence and Soft Computing - ICAISC 2004
• A Statistical Framework for Expression-Based Molecular Classification in Cancer
• High-dimensional Canonical Forest
• Classifying antibodies using flow cytometry data: class prediction and class discovery
• Bayesian Classification of Tumours by Using Gene Expression Data
• Cancer classification using SVM-boosted multiobjective differential fuzzy clustering
• Multiclass cancer classification using gene expression profiling and probabilistic neural networks
• Multidimensional partitioning and bi-partitioning: analysis and application to gene expression data sets
• Gene microarray data classification and prediction based on lifting wavelet
• Evaluation of Multiple Models to Distinguish Closely Related Forms of Disease Using DNA Microarray Data: an Application to Multiple Myeloma
• Classifying Gene Expression Profiles from Pairwise mRNA Comparisons
• Gene selection for cancer classification using support vector machines
• Using the “Hidden” genome to improve classification of cancer types
• Topological analysis of gene expression arrays identifies high risk molecular subtypes in breast cancer
• Efficient multi-class cancer diagnosis algorithm, using a global similarity pattern

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