Bayesian Classification of Tumours by Using Gene Expression Data

DOI10.1111/J.1467-9868.2005.00498.XMaRDI QIDQ5313586zbMATH OpenOpenAlexFDO

Authors Debashis Ghosh, Malay Ghosh, Bani Mallick

Publication date 1 September 2005

Published in Journal of the Royal Statistical Society Series B: Statistical Methodology (Search for Journal in Brave)

Full work available at URL http://hdl.handle.net/2027.42/75678

zbMATH Keywords

Metropolis-Hastings algorithmMarkov chain Monte Carlo methodssupport vector machinesGibbs samplingmicroarraysshrinkage parameters

Mathematics Subject Classification ID

Bayesian inference (62F15) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Medical applications (general) (92C50) Applications of functional analysis in probability theory and statistics (46N30)

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• 10.1162/15324430152748236
• A PAC-Bayesian margin bound for linear classifiers
• Bayesian learning for neural networks
• Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data

Cited in

(43)

• Multiclass sparse logistic regression for classification of multiple cancer types using gene expression data
• Semiparametric regression during 2003--2007
• Bayesian nonlinear regression for large \(p\) small \(n\) problems
• Bayesian Classifiers with Consensus Gene Selection: A Case Study in the Systemic Lupus Erythematosus
• Bayesian semi-supervised learning with support vector machine
• Simultaneous cancer classification and gene selection with Bayesian nearest neighbor method: an integrated approach
• Simple Bayesian binary framework for discovering significant genes and classifying cancer diagnosis
• A clustering approach to integrative analyses of multiomic cancer data
• Advances in Intelligent Data Analysis VI
• Bayesian kernel projections for classification of high dimensional data
• Necessary and sufficient conditions for high-dimensional posterior consistency under \(g\)-priors
• Bayesian classification for bivariate normal gene expression
• A Statistical Framework for Expression-Based Molecular Classification in Cancer
• Permuted and augmented stick-breaking Bayesian multinomial regression
• Bayesian approximate kernel regression with variable selection
• Variational Bayes procedure for effective classification of tumor type with microarray gene expression data
• Two-stage Metropolis-Hastings for tall data
• Bayesian variable selection with sparse and correlation priors for high-dimensional data analysis
• On exact Bayesian credible sets for discrete parameters
• Application of Bayesian networks for inferring cause-effect relations from gene expression profiles of cancer versus normal cells
• Classifying tissue samples from measurements on cells with within-class tissue sample heterogeneity
• Consensus analysis of multiple classifiers using non-repetitive variables: diagnostic application to microarray gene expression data
• Posterior impropriety of some sparse Bayesian learning models
• Bayesian binary kernel probit model for microarray based cancer classification and gene selection
• Adversarial classification: an adversarial risk analysis approach
• A Bayesian hybrid huberized support vector machine and its applications in high-dimensional medical data
• Sparse Bayesian multinomial probit regression model with correlation prior for high-dimensional data classification
• Event Models for Tumor Classification with SAGE Gene Expression Data
• Mean field variational Bayesian inference for support vector machine classification
• Tumor classification using phylogenetic methods on expression data
• A statistical approach to set classification by feature selection with applications to classification of histopathology images
• Bayesian hyper-Lassos with non-convex penalization
• Sparse Bayesian variable selection in kernel probit model for analyzing high-dimensional data
• An Analytical Method for Multiclass Molecular Cancer Classification
• Bayesian adaptive nearest neighbor
• Nonparametric variable selection, clustering and prediction for large biological datasets
• Gene expression-based glioma classification using hierarchical Bayesian vector machines
• Classifying Gene Expression Profiles from Pairwise mRNA Comparisons
• Penalized Discriminant Methods for the Classification of Tumors from Gene Expression Data
• Multivariate Bayesian discrimination for varietal authentication of Chilean red wine
• Decision theory classification of high-dimensional vectors based on small samples
• Data augmentation for Bayesian deep learning
• SVM-like decision theoretical classification of high-dimensional vectors

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