An Improved Model for Statistical Alignment

DOI10.1007/3-540-44696-6_1MaRDI QIDQ4801133zbMATH OpenOpenAlexFDO

Authors István Miklós, Z. Toroczkai

Publication date 6 April 2003

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://digital.library.unt.edu/ark:/67531/metadc933080/

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Problems related to evolution (92D15) Markov processes (60J99) Distribution theory (60E99)

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• Algorithm for statistical alignment of two sequences derived from a Poisson sequence length distribution
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• A context dependent pair hidden Markov model for statistical alignment
• The Doi-Edwards model without independent alignment
• A Bayesian Insertion/Deletion Algorithm for Distant Protein Motif Searching via Entropy Filtering
• A new molecular evolution model for limited insertion independent of substitution

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