scientific article; zbMATH DE number 2247647

MaRDI QIDQ5718840zbMATH OpenFDO

Authors Dirk Metzler, Roland Fleißner, Anton Wakolbinger, Arndt von Haeseler

Publication date 16 January 2006

zbMATH Keywords

Heirs linesindel foreststree reconstruction

Mathematics Subject Classification ID

Trees (05C05) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Problems related to evolution (92D15)

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(12)

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• The independent loss model with ordered insertions for the evolution of CRISPR spacers
• Invertibility of the TKF model of sequence evolution
• An improved algorithm for statistical alignment of sequences related by a star tree
• Transposition based contextual insertion on linear DNA strands with deletion precedence
• Using the EM algorithm to estimate parameters in phylogenetic tree reconstruction
• Phylogenetic Profiling of Insertions and Deletions in Vertebrate Genomes
• An Improved Model for Statistical Alignment
• Optimal sequence length requirements for phylogenetic tree reconstruction with indels
• The Deletion-Insertion model applied to the genome rearrangement problem
• Pairwise sequence alignment at arbitrarily large evolutionary distance
• Predicting RNA secondary structures with pseudoknots by MCMC sampling

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