DNA rearrangements through spatial graphs

DOI10.1007/978-3-642-13962-8_24MaRDI QIDQ3576208zbMATH OpenOpenAlexFDO

Authors Masahico Saito, Nataşa Jonoska

Publication date 29 July 2010

Published in Programs, Proofs, Processes (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-642-13962-8_24

zbMATH Keywords

ciliatesDNA rearrangementsspatial graphsvertex smoothing

Mathematics Subject Classification ID

Applications of graph theory (05C90) Genetics and epigenetics (92D10) Protein sequences, DNA sequences (92D20)

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Cited in

(12)

• Mapping DNA by stochastic relaxation
• DNA physical mapping and alternating Eulerian cycles in colored graphs
• RNA-guided DNA assembly
• Four-regular graphs with rigid vertices associated to DNA recombination
• scientific article; zbMATH DE number 1974594 (Why is no real title available?)
• scientific article; zbMATH DE number 1738644 (Why is no real title available?)
• BIOLOGICAL DISTANCES ON DNA KNOTS AND LINKS: Applications to XER recombination
• Graphs associated with DNA rearrangements and their polynomials
• Invariants of graphs modeling nucleotide rearrangements
• Rewriting rule chains modeling DNA rearrangement pathways
• Characterizing cancer chromosome aberration pathways using multigraphs
• DNA recombination through assembly graphs

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