Efficient detection and classification of epigenomic changes under multiple conditions

DOI10.1111/BIOM.13477MaRDI QIDQ6055639zbMATH OpenOpenAlexFDO

Authors Pedro L. Baldoni, Naim U. Rashid, Joseph G. Ibrahim

Publication date 30 October 2023

Published in Biometrics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1111/biom.13477

zbMATH Keywords

ChIP-seqdifferential peak callepigenomicshidden Markov modelmixture model

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10)

Recommendations

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Cites work

• Empirical Bayes Analysis of a Microarray Experiment

Cited in

(4)

• Detection of epigenomic network community oncomarkers
• Change point analysis of histone modifications reveals epigenetic blocks linking to physical domains
• Improved detection of epigenomic marks with mixed-effects hidden Markov models
• Modeling epigenetic modifications under multiple treatment conditions

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