FRK
A tool for spatial/spatio-temporal modelling and prediction with large datasets. The approach models the field, and hence the covariance function, using a set of basis functions. This fixed-rank basis-function representation facilitates the modelling of big data, and the method naturally allows for non-stationary, anisotropic covariance functions. Discretisation of the spatial domain into so-called basic areal units (BAUs) facilitates the use of observations with varying support (i.e., both point-referenced and areal supports, potentially simultaneously), and prediction over arbitrary user-specified regions. 'FRK' also supports inference over various manifolds, including the 2D plane and 3D sphere, and it provides helper functions to model, fit, predict, and plot with relative ease. Version 2.0.0 and above also supports the modelling of non-Gaussian data (e.g., Poisson, binomial, negative-binomial, gamma, and inverse-Gaussian) by employing a generalised linear mixed model (GLMM) framework. Zammit-Mangion and Cressie <doi:10.18637/jss.v098.i04> describe 'FRK' in a Gaussian setting, and detail its use of basis functions and BAUs, while Sainsbury-Dale et al. <arXiv:2110.02507> describe 'FRK' in a non-Gaussian setting; two vignettes are available that summarise these papers and provide additional examples.
- Efficient Algorithms for Bayesian Nearest Neighbor Gaussian Processes
- IDE
- ppmData
- spamtree
- Triangulation
- Hutch++
- LocalizeSL
- sparsegl
- IceCast
- qqboxplot
- statFEM
- GeoModels
- GPvecchia
- smnet
- SSNbayes
- FUNFITS
- A sparse linear algebra algorithm for fast computation of prediction variances with Gaussian Markov random fields
- Spatio-temporal modeling of particulate matter concentration through the SPDE approach
- Big data sampling and spatial analysis: ``which of the two ladles, of fig-wood or gold, is appropriate to the soup and the pot?
- Principles for statistical inference on big spatio-temporal data from climate models
- A multi-resolution model for non-Gaussian random fields on a sphere with application to ionospheric electrostatic potentials
- Modeling nonstationary covariance function with convolution on sphere
- Spatial data compression via adaptive dispersion clustering
- Gstat
- geoR
- Algorithm 761
- ArcGIS Desktop
- A comparison of centring parameterisations of Gaussian process-based models for Bayesian computation using MCMC
- Spherical process models for global spatial statistics
- Multivariate spatial meta kriging
- Multi-rubric models for ordinal spatial data with application to online ratings data
- Estimation of spatial autoregressive models with measurement error for large data sets
- Bayesian sequential data collection for stochastic simulation calibration
- Algorithm 611
- Two-scale spatial models for binary data
- Computationally efficient multivariate spatio-temporal models for high-dimensional count-valued data (with discussion)
- Hot enough for you? a spatial exploratory and inferential analysis of North American climate-change projections
- gss
- R-Geo
- geoRglm
- GMRFLib
- Small area estimation under spatial nonstationarity
- INLA
- spam
- R-INLA
- Spatiotemporal lagged models for variable rate irrigation in agriculture
- spectralGP
- fields
- RandomFields
- gstat
- geofd
- Multivariate isotropic random fields on spheres: nonparametric Bayesian modeling and L^p fast approximations
- Max-and-smooth: a two-step approach for approximate Bayesian inference in latent Gaussian models
- On the interface between nested designs and the multi-step interpolator
- Stochastic local interaction model: an alternative to kriging for massive datasets
- Uncertainty quantification of a computer model for binary black hole formation
- A non-stationary model for spatially dependent circular response data based on wrapped Gaussian processes
- Kryging: geostatistical analysis of large-scale datasets using Krylov subspace methods
- Testing independence between two spatial random fields
- Competition on spatial statistics for large datasets
- Healpix
- Multi-scale Vecchia approximations of Gaussian processes
- Spatial regression with non-parametric modeling of Fourier coefficients
- Probabilistic forecasts of arctic sea ice thickness
- On hierarchical Bayesian spatial small area model for binary data under spatial misalignment
- Efficiency improvement of kriging surrogate model by subset simulation in implicit expression problems
- Interpolation of daily rainfall data using censored Bayesian spatially varying model
- A scalable Bayesian nonparametric model for large spatio-temporal data
- Screening effect in isotropic Gaussian processes
- Spatial analysis and visualization of global data on multi-resolution hexagonal grids
- Spatio-temporal modeling of global ozone data using convolution
- A memory-free spatial additive mixed modeling for big spatial data
- ABC-SubSim
- Multi-scale process modelling and distributed computation for spatial data
- spBayes
- Bayesian inference of spatio-temporal changes of arctic sea ice
- Combining heterogeneous spatial datasets with process-based spatial fusion models: a unifying framework
- Climate projections using Bayesian model averaging and space-time dependence
- A case study competition among methods for analyzing large spatial data
- Predicting paleoclimate from compositional data using multivariate Gaussian process inverse prediction
- astsa
- EnviroStat
- Towards a complete picture of stationary covariance functions on spheres cross time
- Bayesian nonstationary Gaussian process models via treed process convolutions
- Randomized algorithms of maximum likelihood estimation with spatial autoregressive models for large-scale networks
- ProbForecastGOP
- Comparing and selecting spatial predictors using local criteria
- Rejoinder on: ``Comparing and selecting spatial predictors using local criteria
- Bayesian binomial mixture models for estimating abundance in ecological monitoring studies
- QUIC
- Full scale multi-output Gaussian process emulator with nonseparable auto-covariance functions
- SDSM
- SDaA
- Gaussian process emulators for computer experiments with inequality constraints
- Likelihood approximation with hierarchical matrices for large spatial datasets
- spcov
- Stem
- Stochastic approximation of score functions for Gaussian processes
- Capturing multivariate spatial dependence: model, estimate and then predict
- Krylstat
This page was built for software: FRK
