GEPASI
From MaRDI portal
Cited in
(52)- Modelling biochemical pathways through enhanced \(\pi\)-calculus
- \textit{NF}-\(\kappa B\) oscillations and cell-to-cell variability
- Perturbation theory in the catalytic rate constant of the Henri-Michaelis-Menten enzymatic reaction
- Petri net models for the semi-automatic construction of large scale biological networks
- Yeast glycolytic oscillations that are not controlled by a single oscillophore: a new definition of oscillophore strength
- Review: Game theory of public goods in one-shot social dilemmas without assortment
- Quantifying macrophage defects in type 1 diabetes
- Simulations show that a small part of variable chlorophyll \(a\) fluorescence originates in photosystem I and contributes to overall fluorescence rise
- A theoretical study on effect of the initial redox state of cytochrome \(b_{559}\) on maximal chlorophyll fluorescence level (\(F_M\)): implications for photoinhibition of photosystem II
- Nonlinear effects in macromolecular assembly and dosage sensitivity
- Chlorophyll \(a\) fluorescence rise induced by high light illumination of dark-adapted plant tissue studied by means of a model of photosystem II and considering photosystem II heterogeneity
- A general biochemical kinetics data fitting algorithm for quasi-steady-state detection
- Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
- A fully adaptive reaction-diffusion integration scheme with applications to systems biology
- KINSOLVER: A simulator for computing large ensembles of biochemical and gene regulatory networks
- Stochastic and delayed stochastic models of gene expression and regulation
- Numerical simulation of the in vivo fluorescence in plants
- J3DV
- KINSOLVER
- IntelliGEN
- SCAMP
- Prism
- MCELL
- PySCeS
- Stella
- A framework for whole-cell mathematical modeling
- E-CELL
- MetaModel
- Cellware
- KinFitSim
- MEG
- Bio-SPICE
- Trading public goods stabilizes interspecific mutualism
- Virtual Cell
- SGN Sim
- DynaFit
- KINFIT
- STOCHSIM
- JigCell
- MoVisPP
- VisANT
- REVEAL
- Control of glutathione and phytochelatin synthesis under cadmium stress. Pathway modeling for plants
- From Petri Nets to Differential Equations – An Integrative Approach for Biochemical Network Analysis
- scientific article; zbMATH DE number 1950560 (Why is no real title available?)
- Applications and Theory of Petri Nets 2004
- BDI-modelling of complex intracellular dynamics
- Simulating cellular dynamics through a coupled transcription, translation, metabolic model.
- The markup is the model: reasoning about systems biology models in the semantic web era
- A computational algebra approach to the reverse engineering of gene regulatory networks
- An integrated model of glucose and galactose metabolism regulated by the GAL genetic switch
- On the approaches applied in formulation of a kinetic model of photosystem II: different approaches lead to different simulations of the chlorophyll \textit{a} fluorescence transients
This page was built for software: GEPASI
