NMF

MaRDI QIDQ20155swMATHCRANFDO

Authors Renaud Gaujoux

Last update 8 February 2024

Copyright license GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier 0.26, 0.2.2, 0.2.3, 0.2.4, 0.2, 0.3.1, 0.3.3, 0.4.1, 0.4.3, 0.4.4, 0.4.6, 0.4.7, 0.4.8, 0.4, 0.5.02, 0.5.05, 0.5.06, 0.5, 0.16.1, 0.16.2, 0.16.6, 0.17, 0.20.2, 0.20.5, 0.20.6, 0.20, 0.21.0, 0.22.0, 0.23.0, 0.24.0, 0.25, 0.27

Official website http://cran.r-project.org/web/packages/NMF/index.html

Source code repository https://github.com/cran/NMF

Description

Provides a framework to perform Non-negative Matrix Factorization (NMF). The package implements a set of already published algorithms and seeding methods, and provides a framework to test, develop and plug new/custom algorithms. Most of the built-in algorithms have been optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines.

Cited in

(54)

• Optimal Bayesian clustering using non-negative matrix factorization
• Superheat: An R Package for Creating Beautiful and Extendable Heatmaps for Visualizing Complex Data
• Odor space navigation using multisensory E-nose
• Multi-target prediction: a unifying view on problems and methods
• A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data
• LibNMF -- a library for nonnegative matrix factorization
• CLUTO
• RankAggreg
• BicAT
• SEER*Stat
• bioNMF
• biclust
• heatmaply
• DNAcopy
• brainGraph
• skmeans
• libNMF
• NMF DTU Toolbox
• NMFN
• doRedis
• ONE
• LCE
• NMF-mGPU
• CoClust
• meanShiftR
• changepoint.geo
• fabisearch
• iClusterPlus
• FSCseq
• NB.MClust
• sigminer
• diceR
• hNMF
• spectralAnalysis
• DBNMFrank
• scITD
• shattering
• SpNMF
• InterSIM
• IntNMF
• vccp
• gSeg
• onlineCOV
• SMILE: a novel dissimilarity-based procedure for detecting sparse-specific profiles in sparse contingency tables
• Model-based feature selection and clustering of RNA-seq data for unsupervised subtype discovery
• dmf
• Health policyholder clustering using medical consumption. A useful tool for targeting prevention plans
• hdcd
• iheatmapr
• A Comparative Study of Pairwise Learning Methods Based on Kernel Ridge Regression
• ConsensusClusterPlus
• Statistical Methods for Minimax Estimation in Linear Models with Unknown Design Over Finite Alphabets
• A variable neighborhood search heuristic for nonnegative matrix factorization with application to microarray data
• Bayesian predictive modeling for genomic based personalized treatment selection

This page was built for software: NMF