NMF

MaRDI QIDQ20155swMATHCRANFDO

Authors Renaud Gaujoux, Cathal Seoighe

Last update 22 August 2024

Copyright license GNU General Public License, version 2.0, GNU General Public License, version 3.0

Software version identifier 0.26, 0.2.2, 0.2.3, 0.2.4, 0.2, 0.3.1, 0.3.3, 0.4.1, 0.4.3, 0.4.4, 0.4.6, 0.4.7, 0.4.8, 0.4, 0.5.02, 0.5.05, 0.5.06, 0.5, 0.16.1, 0.16.2, 0.16.6, 0.17, 0.20.2, 0.20.5, 0.20.6, 0.20, 0.21.0, 0.22.0, 0.23.0, 0.24.0, 0.25, 0.27, PACKAGES.rds, 0.28

Official website http://cran.r-project.org/web/packages/NMF/index.html

Source code repository https://github.com/cran/NMF

Description

Provides a framework to perform Non-negative Matrix Factorization (NMF). The package implements a set of already published algorithms and seeding methods, and provides a framework to test, develop and plug new/custom algorithms. Most of the built-in algorithms have been optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines.

Cited in

(56)

• DBNMFrank
• scITD
• shattering
• vccp
• hdcd
• onlineCOV
• gSeg
• iheatmapr
• SpNMF
• InterSIM
• IntNMF
• Odor space navigation using multisensory E-nose
• SMILE: a novel dissimilarity-based procedure for detecting sparse-specific profiles in sparse contingency tables
• Optimal Bayesian clustering using non-negative matrix factorization
• CLUTO
• RankAggreg
• A variable neighborhood search heuristic for nonnegative matrix factorization with application to microarray data
• Multi-target prediction: a unifying view on problems and methods
• Health policyholder clustering using medical consumption. A useful tool for targeting prevention plans
• Model-based feature selection and clustering of RNA-seq data for unsupervised subtype discovery
• BicAT
• SEER*Stat
• bioNMF
• biclust
• heatmaply
• DNAcopy
• brainGraph
• LibNMF -- a library for nonnegative matrix factorization
• libNMF
• NMF DTU Toolbox
• NMFN
• Superheat: An R Package for Creating Beautiful and Extendable Heatmaps for Visualizing Complex Data
• skmeans
• doRedis
• ONE
• LCE
• NMF-mGPU
• CoClust
• meanShiftR
• A non-negative matrix factorization framework for identifying modular patterns in metagenomic profile data
• Statistical Methods for Minimax Estimation in Linear Models with Unknown Design Over Finite Alphabets
• changepoint.geo
• A Comparative Study of Pairwise Learning Methods Based on Kernel Ridge Regression
• fabisearch
• iClusterPlus
• NB.MClust
• FSCseq
• Bayesian predictive modeling for genomic based personalized treatment selection
• dmf
• ConsensusClusterPlus
• sigminer
• diceR
• CNSigs
• MetabolSSMF
• hNMF
• spectralAnalysis

This page was built for software: NMF