Pfold
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Cited in
(32)- Rapid ab initio prediction of RNA pseudoknots via graph tree decomposition
- The most probable annotation problem in HMMs and its application to bioinformatics
- Enumerating secondary structures and structural moieties for circular RNAs
- Combinatorics of locally optimal RNA secondary structures
- JGraphT
- RNAshapes
- tRNAscan-SE
- RNAfold
- RNAsubopt
- Cofolga
- Mfold
- UNAFold
- snoSeeker
- CONTRAfold
- HotKnots
- ProbKnot
- ESTScan
- ExonHunter
- NNDB
- RNAKinetics
- RSEARCH
- TPstructure
- PSoL
- KineFold
- MARNA
- ddbRNA
- Asymptotic distribution of motifs in a stochastic context-free grammar model of RNA folding
- Topological language for RNA
- Asymptotic number of hairpins of saturated RNA secondary structures
- Evolutionary rate variation and RNA secondary structure prediction
- On the page number of RNA secondary structures with pseudoknots
- Computational methods in noncoding RNA research
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