Evolutionary rate variation and RNA secondary structure prediction

DOI10.1016/J.COMPBIOLCHEM.2004.04.001MaRDI QIDQ2490600zbMATH OpenOpenAlexWikidataFDO

Authors Yanyan Li

Publication date 16 May 2006

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2004.04.001

zbMATH Keywords

EvolutionHIV

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Medical applications (general) (92C50) Problems related to evolution (92D15)

Recommendations

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Cites work

• Simultaneous Solution of the RNA Folding, Alignment and Protosequence Problems

Cited in

(6)

• Temporal ordering of substitutions in RNA evolution: uncovering the structural evolution of the Human Accelerated Region 1
• Advanced formulation of base pair changes in the stem regions of ribosomal RNAs; its application to mitochondrial rRNAs for resolving the phylogeny of animals
• Comparing two \(K\)-category assignments by a \(K\)-category correlation coefficient
• Migration differential evolution ensemble and its application in predicting RNA secondary structure
• scientific article; zbMATH DE number 912708 (Why is no real title available?)
• Chance and necessity in evolution: lessons from RNA

Describes a project that uses

Uses Software

• fastDNAml
• Pfold
• RSEARCH

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