Statistical shape analysis of simplified neuronal trees

DOI10.1214/17-AOAS1107MaRDI QIDQ1620982zbMATH OpenOpenAlexFDO

Authors A. Duncan, Anuj Srivastava, E. Klassen

Publication date 15 November 2018

Published in The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL https://projecteuclid.org/euclid.aoas/1536652959

zbMATH Keywords

clusteringelastic shape analysisneuron deformationneuron morphologytree geodesicstree registration

Mathematics Subject Classification ID

Applications of graph theory (05C90) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Neural networks for/in biological studies, artificial life and related topics (92B20)

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Cites work

• A constrained edit distance between unordered labeled trees
• A principal component analysis for trees
• A shortest augmenting path algorithm for dense and sparse linear assignment problems
• Functional and shape data analysis
• Geometry of the space of phylogenetic trees
• scientific article; zbMATH DE number 1194132 (Why is no real title available?)
• scientific article; zbMATH DE number 1324235 (Why is no real title available?)
• Object oriented data analysis: sets of trees
• Optimal reparametrizations in the square root velocity framework
• Precise matching of PL curves in R^N in the square root velocity framework
• Statistical modeling of curves using shapes and related features
• The Tree-to-Tree Correction Problem
• The tree-to-tree editing problem
• Visualizing the structure of large trees

Cited in

(13)

• Statistical shape analysis of brain arterial networks (BAN)
• Statistical analysis and modeling of the geometry and topology of plant roots
• Analysis of neuronal dendrite patterns using eigenvalues of graph Laplacians
• COMPLEXITY MAPS REVEAL CLUSTERS IN NEURONAL ARBORIZATIONS
• scientific article; zbMATH DE number 6985563 (Why is no real title available?)
• scientific article; zbMATH DE number 1929184 (Why is no real title available?)
• A graphical approach to a model of a neuronal tree with a variable diameter
• A new variational model for shape graph registration with partial matching constraints
• Simplifying transforms for general elastic metrics on the space of plane curves
• Digital images of multipolar neurons from the human dentate nucleus: topologic and morphometric analysis accompanied with the classification by cluster analysis
• Statistical Shape Analysis of Neuroanatomical Structures via Level-Set--based Shape Morphing
• Functional data analysis: an introduction and recent developments
• Statistical analysis and parsimonious modelling of dendrograms of \textit{in vitro} neurones

Describes a project that uses

Uses Software

• NeuroMorpho

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