Functional and shape data analysis
elastic registrationfunction data analysisfunctional dataRiemannian geometryshape data analysisshapes of planar curvesstatistical modeling on nonlinear manifolds
Mathematics for nonmathematicians (engineering, social sciences, etc.) (00A06) Curves in Euclidean and related spaces (53A04) Local Riemannian geometry (53B20) Geodesics in global differential geometry (53C22) Introductory exposition (textbooks, tutorial papers, etc.) pertaining to statistics (62-01) Factor analysis and principal components; correspondence analysis (62H25) Image analysis in multivariate analysis (62H35) Applications of statistics to biology and medical sciences; meta analysis (62P10) Computer-aided design (modeling of curves and surfaces) (65D17) Numerical aspects of computer graphics, image analysis, and computational geometry (65D18) Pattern recognition, speech recognition (68T10) Computer graphics; computational geometry (digital and algorithmic aspects) (68U05) Computer science aspects of computer-aided design (68U07)
The first two chapters of this book deal with first steps in shape analysis. Chapter 3 introduces the necessary background from Riemannian geometry, chapter 4 deals with functional data and elastic registration, Chapters 5 and 6 with shapes of planar curves, Chapter 7 with statistical modeling on nonlinear manifolds, and the remaining four chapters have further related topics. The authors dedicate their book to Ulf Grenander (1923--2016). In the acknowledgement, they write that they followed the path proposed by him in his book: [\textit{U. Grenander}, General pattern theory. A mathematical study of regular structures. Oxford: Univ. Press (1994; Zbl 0827.68098)]. Publisher's description: ``This textbook for courses on function data analysis and shape data analysis describes how to define, compare, and mathematically represent shapes, with a focus on statistical modeling and inference. It is aimed at graduate students in analysis in statistics, engineering, applied mathematics, neuroscience, biology, bioinformatics, and other related areas. The interdisciplinary nature of the broad range of ideas covered -- from introductory theory to algorithmic implementations and some statistical case studies -- is meant to familiarize graduate students with an array of tools that are relevant in developing computational solutions for shape and related analyses. These tools, gleaned from geometry, algebra, statistics, and computational science, are traditionally scattered across different courses, departments, and disciplines; Functional and Shape Data Analysis offers a unified, comprehensive solution by integrating the registration problem into shape analysis, better preparing graduate students for handling future scientific challenges. Recently, a data-driven and application-oriented focus on shape analysis has been trending. This text offers a self-contained treatment of this new generation of methods in shape analysis of curves. Its main focus is shape analysis of functions and curves -- in one, two, and higher dimensions -- both closed and open. It develops elegant Riemannian frameworks that provide both quantification of shape differences and registration of curves at the same time. Additionally, these methods are used for statistically summarizing given curve data, performing dimension reduction, and modeling observed variability. It is recommended that the reader have a background in calculus, linear algebra, numerical analysis, and computation.
- Data analysis for shapes and images
- Depth for curve data and applications
- Statistical shape analysis of simplified neuronal trees
- Torus principal component analysis with applications to RNA structure
- Comparing curves in homogeneous spaces
- Fractional Sobolev metrics on spaces of immersed curves
- A discrete framework to find the optimal matching between manifold-valued curves
- Closest paths in graph drawings under an elastic metric
- Rate-invariant analysis of covariance trajectories
- Fractional Sobolev metrics on spaces of immersions
- Elastic statistical shape analysis of biological structures with case studies: a tutorial
- A quotient space formulation for generative statistical analysis of graphical data
- Dirichlet depths for point process
- Accelerated information gradient flow
- A numerical framework for elastic surface matching, comparison, and interpolation
- Bayesian regression and classification using Gaussian process priors indexed by probability density functions
- On functional data analysis and related topics
- Tangent functional canonical correlation analysis for densities and shapes, with applications to multimodal imaging data
- Low-rank multi-parametric covariance identification
- The square root normal field distance and unbalanced optimal transport
- Riemannian proximal gradient methods
- Statistical shape analysis of brain arterial networks (BAN)
- A hierarchical geodesic model for longitudinal analysis on manifolds
- Shape analysis of surfaces using general elastic metrics
- Shape-preserving prediction for stationary functional time series
- Multimodal Bayesian registration of noisy functions using Hamiltonian Monte Carlo
- Aggregated pairwise classification of elastic planar shapes
- Functional currents: a new mathematical tool to model and analyse functional shapes
- Computer model calibration based on image warping metrics: an application for sea ice deformation
- Integrated rank-weighted depth
- Outline analyses of the called strike zone in major league Baseball
- Empirical geodesic graphs and CAT(k) metrics for data analysis
- Shape analysis of framed space curves
- Closed-form geodesics and optimization for Riemannian logarithms of Stiefel and flag manifolds
- Robust clustering of functional directional data
- Numerical algorithms for spline interpolation on space of probability density functions
- Bayesian shape-constrained density estimation
- Shape analysis of functional data
- Sub-Riemannian methods in shape analysis
- Biomedical applications of geometric functional data analysis
- Spherical Data Handling and Analysis with R package rcosmo
- Phase-Amplitude Separation and Modeling of Spherical Trajectories
- Endpoint geodesics on the Stiefel manifold embedded in Euclidean space
- Planar morphometrics using Teichmüller maps
- Elastic functional principal component regression
- A geometrically constrained manifold embedding for an extrinsic Gaussian process
- Bayesian Inference on Local Distributions of Functions and Multidimensional Curves with Spherical HMC Sampling
- A geometric approach for computing tolerance bounds for elastic functional data
- Bi-Invariant Dissimilarity Measures for Sample Distributions in Lie Groups
- Regression models using the LINEX loss to predict lower bounds for the number of points for approximating planar contour shapes
- A new variational model for shape graph registration with partial matching constraints
- Parallel tempering strategies for model-based landmark detection on shapes
- Computing the Riemannian logarithm on the Stiefel manifold: metrics, methods, and performance
- A PDE-based method for shape registration
- A relaxed approach for curve matching with elastic metrics
- Dictionary Learning for Two-Dimensional Kendall Shapes
- Distribution on warp maps for alignment of open and closed curves
- On shape analysis of functional data
- The Statistical Face of a Region Under Monsoon Rainfall in Eastern India
- Stochastic approximation for optimization in shape spaces
- Nonparametric Bayes models of fiber curves connecting brain regions
- Automatic detection and uncertainty quantification of landmarks on elastic curves
- Shape-constrained Gaussian process regression for surface reconstruction and multimodal, non-rigid image registration
- Modeling Network Populations via Graph Distances
- Penalized model-based clustering of complex functional data
- Cross‐component registration for multivariate functional data, with application to growth curves
- Statistical Analysis of Locally Parameterized Shapes
- A novel framework for joint sparse clustering and alignment of functional data
- Alpha geodesic distances for clustering of shapes
- Bayesian Framework for Simultaneous Registration and Estimation of Noisy, Sparse, and Fragmented Functional Data
- Bayesian spatial homogeneity pursuit of functional data: an application to the U.S. income distribution
- Square Root Normal Fields for Lipschitz Surfaces and the Wasserstein Fisher Rao Metric
- A scalable Matérn Gaussian process for learning spatial curves distributions
- Functional Additive Models on Manifolds of Planar Shapes and Forms
- Planar curve registration using Bayesian inversion
- De Casteljau's algorithm in geometric data analysis: theory and application
- Completeness and Geodesic Distance Properties for Fractional Sobolev Metrics on Spaces of Immersed Curves
- Covariance-based soft clustering of functional data based on the Wasserstein-Procrustes metric
- A general framework for multivariate functional principal component analysis of amplitude and phase variation
- Sobolev metrics on spaces of manifold valued curves
- Predicting fatigue from heart rate signatures using functional logistic regression
- Shape-based functional data analysis
- Comments on: ``Shape-based functional data analysis
- Comments on: ``Shape-based functional data analysis
- A stochastic process representation for time warping functions
- Geometric framework for statistical analysis of eye tracking heat maps, with application to a tobacco waterpipe study
- Logistic regression models for elastic shape of curves based on tangent representations
- A Wasserstein-type distance for Gaussian mixtures on vector bundles with applications to shape analysis
- Analysis of shape data: from landmarks to elastic curves
- Intrinsic Riemannian metrics on spaces of curves: theory and computation
- Shape spaces: from geometry to biological plausibility
- A single shooting method with approximate Fréchet derivative for computing geodesics on the Stiefel manifold
- A new Bayesian approach to global optimization on parametrized surfaces in \(\mathbb{R}^3\)
- Scalable multiple changepoint detection for functional data sequences
- Elastic functional changepoint detection of climate impacts from localized sources
- Medoid splits for efficient random forests in metric spaces
- Elastic Depths for Detecting Shape Anomalies in Functional Data
- Modality-Constrained Density Estimation via Deformable Templates
- Estimation of Spatial Deformation for Nonstationary Processes via Variogram Alignment
- Multiple closed curve modeling with uncertainty quantification for shape analysis
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