In silico analysis of antibody triggering biofilm associated protein in \textit{Acinetobacter baumannii}

DOI10.1016/J.JTBI.2010.06.014MaRDI QIDQ1722844zbMATH OpenOpenAlexWikidataFDO

Authors Mohammad Reza Rahbar, Iraj Rasooli, Seyed Latif Mousavi Gargari, Yaser Fattahian, J. Amani

Publication date 18 February 2019

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2010.06.014

zbMATH Keywords

\textit{A. baumannii}bioinformatic analysisimmunogenicitysurface proteintandem repeat (TR)

Mathematics Subject Classification ID

Cell biology (92C37) Protein sequences, DNA sequences (92D20)

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Cites work

• A Mathematical Theory of Communication

Cited in

(6)

• Comparative genomics study of \textit{Salmonella Typhimurium} LT2 for the identification of putative therapeutic candidates
• Insights into the interaction of key biofilm proteins in \textit{Pseudomonas aeruginosa} PAO1 with TiO\(_2\) nanoparticle: an \textit{in silico} analysis
• Predicting the ligand-binding properties of \textit{Borrelia burgdorferi} s.s. Bmp proteins in light of the conserved features of related \textit{Borrelia} proteins
• A potential in silico antibody-antigen based diagnostic test for precise identification of \textit{Acinetobacter baumannii}
• Identification of potential therapeutic targets in \textit{Neisseria gonorrhoeae} by an \textit{in-silico} approach
• Rational design, conformational analysis and membrane-penetrating dynamics study of Bac2A-derived antimicrobial peptides against gram-positive clinical strains isolated from pyemia

Describes a project that uses

Uses Software

• ConSeq
• MUSCLE
• PROSITE
• TM-align
• PSLpred
• MAMMOTH
• Clustal X
• Bcepred
• iTOL
• PSI-BLAST
• BLAST
• ConFunc

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