The spatial Lambda-Fleming-Viot process with fluctuating selection

DOI10.1214/21-EJP593zbMATH Open1473.60084OpenAlexW3158140747MaRDI QIDQ2042864FDOQ2042864

Authors Niloy Biswas, Alison Etheridge, Aleksander Klimek 

Publication date 21 July 2021

Published in Electronic Journal of Probability (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1802.08188

zbMATH Keywords

scaling limitsfluctuating selectionstochastic growth modelstracer dynamicsspatial Lambda Fleming-Viot model

Mathematics Subject Classification ID

Point processes (e.g., Poisson, Cox, Hawkes processes) (60G55) Stochastic partial differential equations (aspects of stochastic analysis) (60H15) Problems related to evolution (92D15) Continuous-time Markov processes on general state spaces (60J25) Random measures (60G57)

Abstract: We are interested in populations in which the fitness of different genetic types fluctuates in time and space, driven by temporal and spatial fluctuations in the environment. For simplicity, our population is assumed to be composed of just two genetic types. Short bursts of selection acting in opposing directions drive to maintain both types at intermediate frequencies, while the fluctuations due to 'genetic drift' work to eliminate variation in the population. We consider first a population with no spatial structure, modelled by an adaptation of the Lambda (or generalised) Fleming-Viot process, and derive a stochastic differential equation as a scaling limit. This amounts to a limit result for a Lambda-Fleming-Viot process in a rapidly fluctuating random environment. We then extend to a population that is distributed across a spatial continuum, which we model through a modification of the spatial Lambda-Fleming-Viot process with selection. In this setting we show that the scaling limit is a stochastic partial differential equation. As is usual with spatially distributed populations, in dimensions greater than one, the 'genetic drift' disappears in the scaling limit, but here we retain some stochasticity due to the fluctuations in the environment, resulting in a stochastic p.d.e. driven by a noise that is white in time but coloured in space. We discuss the (rather limited) situations under which there is a duality with a system of branching and annihilating particles. We also write down a system of equations that captures the frequency of descendants of particular subsets of the population and use this same idea of 'tracers', which we learned from Hallatschek and Nelson (2008) and Durrett and Fan (2016), in numerical experiments with a closely related model based on the classical Moran model.

Recommendations

• A central limit theorem for the spatial \(\Lambda\)-Fleming-Viot process with selection
• Rescaling limits of the spatial Lambda-Fleming-Viot process with selection
• The spatial \(\Lambda\)-Fleming-Viot process in a random environment
• Large scale behaviour of the spatial \(\varLambda\)-Fleming-Viot process
• Modelling evolution in a spatial continuum

Cites work

• scientific article; zbMATH DE number 1713116 (Why is no real title available?)
• scientific article; zbMATH DE number 5275955 (Why is no real title available?)
• scientific article; zbMATH DE number 4034749 (Why is no real title available?)
• scientific article; zbMATH DE number 4072760 (Why is no real title available?)
• scientific article; zbMATH DE number 3723610 (Why is no real title available?)
• scientific article; zbMATH DE number 6321165 (Why is no real title available?)
• A limit theorem for perturbed operator semigroups with applications to random evolutions
• A new model for evolution in a spatial continuum
• A nonlinear stochastic heat equation: Hölder continuity and smoothness of the density of the solution
• Ancestral processes with selection
• Coexistence in locally regulated competing populations and survival of branching annihilating random walk
• Equivalence of Stochastic Equations and Martingale Problems
• Gene surfing in expanding populations
• Genealogies in expanding populations
• Interacting particles, the stochastic Fisher-Kolmogorov-Petrovsky-Piscounov equation, and duality
• Large time behavior of interface solutions to the heat equation with Fisher-Wright white noise
• Modelling evolution in a spatial continuum
• New results on pathwise uniqueness for the heat equation with colored noise
• On pathwise uniqueness for stochastic heat equations with non-Lipschitz coefficients
• Particle representations for measure-valued population models
• Particle systems with locally dependent branching: long-time behaviour, genealogy and critical parameters.
• Rescaling limits of the spatial Lambda-Fleming-Viot process with selection
• Stochastic flows associated to coalescent processes
• Stochastic p.d.e.'s arising from the long range contact and long range voter processes
• The Yamada-Watanabe-Engelbert theorem for general stochastic equations and inequalities
• The effect of fluctuating selection on the genealogy at a linked site
• The spatial lambda-Fleming-Viot process: an event-based construction and a lookdown representation
• Uniqueness for a class of one-dimensional stochastic PDEs using moment duality.
• Weak and strong solutions of general stochastic models

Cited in

(19)

• Branching Brownian motion and selection in the spatial \(\Lambda\)-Fleming-Viot process
• A \(\Lambda\)-Fleming-Viot type model with intrinsically varying population size
• On \(\Lambda\)-Fleming-Viot processes with general frequency-dependent selection
• Large scale behaviour of the spatial \(\varLambda\)-Fleming-Viot process
• Genealogies in bistable waves
• Stochastic partial differential equations describing neutral genetic diversity under short range and long range dispersal
• Spatial Fleming-Viot models with selection and mutation
• Moran models and Wright–Fisher diffusions with selection and mutation in a one-sided random environment
• Combinatorics of ancestral lines for a Wright-Fisher diffusion with selection in a Lévy environment
• The spatial \(\Lambda\)-Fleming-Viot process in a random environment
• Hölder continuity of the solutions to a class of SPDE's arising from branching particle systems in a random environment
• Looking forwards and backwards: dynamics and genealogies of locally regulated populations
• A central limit theorem for the spatial \(\Lambda\)-Fleming-Viot process with selection
• Modelling evolution in a spatial continuum
• The spatial \(\Lambda\)-coalescent
• Rescaling limits of the spatial Lambda-Fleming-Viot process with selection
• On the coming down from infinity of coalescing Brownian motions
• Fluctuation limits of a locally regulated population and generalized Langevin equations
• Measure-valued growth processes in continuous space and growth properties starting from an infinite interface

Describes a project that uses

Uses Software

• R

This page was built for publication: The spatial Lambda-Fleming-Viot process with fluctuating selection

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2042864)