Weakly reversible CF-decompositions of chemical kinetic systems
From MaRDI portal
Publication:2143458
DOI10.1007/S10910-022-01332-ZzbMATH Open1492.92164arXiv2104.08429OpenAlexW3155560674MaRDI QIDQ2143458FDOQ2143458
Authors: Bryan S. Hernandez, Eduardo R. Mendoza 
Publication date: 31 May 2022
Published in: Journal of Mathematical Chemistry (Search for Journal in Brave)
Abstract: This paper studies chemical kinetic systems which decompose into weakly reversible complex factorizable (CF) systems. Among power law kinetic systems, CF systems (denoted as PL-RDK systems) are those where branching reactions of a reactant complex have identical rows in the kinetic order matrix. Mass action and generalized mass action systems (GMAS) are well-known examples. Schmitz's global carbon cycle model is a previously studied non-complex factorizable (NF) power law system (denoted as PL-NDK). We derive novel conditions for the existence of weakly reversible CF-decompositions and present an algorithm for verifying these conditions. We discuss methods for identifying independent decompositions, i.e., those where the stoichiometric subspaces of the subnetworks form a direct sum, as such decompositions relate positive equilibria sets of the subnetworks to that of the whole network. We then use the results to determine the positive equilibria sets of PL-NDK systems which admit an independent weakly reversible decomposition into PL-RDK systems of PLP type, i.e., the positive equilibria are log-parametrized, which is a broad generalization of a Deficiency Zero Theorem of Fortun et al. (2019).
Full work available at URL: https://arxiv.org/abs/2104.08429
Recommendations
- On the independence of fundamental decompositions of power-law kinetic systems
- Common complexes of decompositions and complex balanced equilibria of chemical reaction networks
- Fundamental Decompositions and Multistationarity of Power-Law Kinetic Systems
- Analysis of equilibria properties of chemical reaction networks with independent decompositions for classes of kinetics
- scientific article; zbMATH DE number 7414723
power lawchemical reaction networkschemical kinetic systemscarbon cycle modelcomplex factorizable systemsindependent decompositionsnon-complex factorizable systemsweakly reversible decompositions
Cites Work
- Graph theory
- Digraphs
- The existence and uniqueness of steady states for a class of chemical reaction networks
- Chemical reaction network approaches to biochemical systems theory
- Reaction networks and kinetics of biochemical systems
- Generalized mass-action systems and positive solutions of polynomial equations with real and symbolic exponents (invited talk)
- Joining and decomposing reaction networks
- Linear conjugacy of chemical kinetic systems
- A computational approach to multistationarity of power-law kinetic systems
- A computational approach to multistationarity in poly-PL kinetic systems
- Absolute concentration robustness in power law kinetic systems
- A deficiency zero theorem for a class of power-law kinetic systems with non-reactant-determined interactions
- Fundamental Decompositions and Multistationarity of Power-Law Kinetic Systems
- Positive equilibria of Hill-type kinetic systems
- Positive equilibria of a class of power-law kinetics
- Reactant subspaces and kinetics of chemical reaction networks
- Independent decompositions of chemical reaction networks
- Common complexes of decompositions and complex balanced equilibria of chemical reaction networks
- Independent, incidence independent and weakly reversible decompositions of chemical reaction networks
- A computational approach to concentration robustness in power law kinetic systems of Shinar-Feinberg type
- Concentration robustness in LP kinetic systems
Cited In (5)
- Comparative analysis of carbon cycle models via kinetic representations
- Decomposition and factorization of chemical reaction transducers
- Positive steady states of a class of power law systems with independent decompositions
- Common complexes of decompositions and complex balanced equilibria of chemical reaction networks
- Independent, incidence independent and weakly reversible decompositions of chemical reaction networks
Uses Software
This page was built for publication: Weakly reversible CF-decompositions of chemical kinetic systems
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2143458)
