Allele frequency spectra in structured populations: novel-allele probabilities under the labelled coalescent

DOI10.1101/2019.12.20.883629OpenAlexW2997760158WikidataQ90110580 ScholiaQ90110580MaRDI QIDQ2185199FDOQ2185199

Authors: Marcy K. Uyenoyama, Naoki Takebayashi, Seiji Kumagai 

Publication date: 4 June 2020

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1101/2019.12.20.883629

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zbMATH Keywords

importance samplingcoalescencepopulation structureEwens sampling formulaallele frequency spectruminfinite-allele mutation

Mathematics Subject Classification ID

Biology and other natural sciences (92-XX)

Cites Work

• The sampling theory of selectively neutral alleles
• Addendum to a paper of W. Ewens
• Simulating probability distributions in the coalescent
• Ancestral inference in population genetics
• Importance sampling for the infinite sites model
• Title not available (Why is that?)
• Inference in Molecular Population Genetics
• Importance sampling on coalescent histories. I
• International encyclopedia of statistical science.
• The sampling theory of neutral alleles and an urn model in population genetics
• A walk through combinatorics. An introduction to enumeration and graph theory
• Conditional genealogies and the age of a neutral mutant
• Stepwise mutation likelihood computation by sequential importance sampling in subdivided population models
• Importance sampling on coalescent histories. II: Subdivided population models
• Ewens' sampling formula and related formulae: combinatorial proofs, extensions to variable population size and applications to ages of alleles
• Inductive determination of allele frequency spectrum probabilities in structured populations

Cited In (4)

• On the number of allelic types for samples taken from exchangeable coalescents with mutation
• Inductive determination of allele frequency spectrum probabilities in structured populations
• The site-frequency spectrum associated with \(\varXi\)-coalescents
• Fifty years of theoretical population biology

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