Neural codes and the factor complex

DOI10.1016/j.aam.2019.101977zbMath1471.92076arXiv1904.03235OpenAlexW2996589193WikidataQ126567712 ScholiaQ126567712MaRDI QIDQ2300577

Anne Shiu, Laura Felicia Matusevich, Alexander Ruys de Perez

Publication date: 27 February 2020

Published in: Advances in Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1904.03235

zbMATH Keywords

combinatoricsneuronscognitioncommutative algebraStanley-Reisner

Mathematics Subject Classification ID

Neural biology (92C20) Applications of the theory of convex sets and geometry of numbers (covering radius, etc.) to coding theory (94B75) Computational methods for problems pertaining to biology (92-08) Combinatorial aspects of simplicial complexes (05E45) Combinatorial aspects of commutative algebra (05E40)

Related Items

Nondegenerate Neural Codes and Obstructions to Closed-Convexity ⋮ Oriented matroids and combinatorial neural codes ⋮ Wheels: a new criterion for non-convexity of neural codes ⋮ Embedding dimension phenomena in intersection complete codes

Uses Software

• neural ideal

Cites Work

• The neural ring: an algebraic tool for analyzing the intrinsic structure of neural codes
• Obstructions to convexity in neural codes
• Every binary code can be realized by convex sets
• Neural ideals in SageMath
• Neural ideals and stimulus space visualization
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• Strongly maximal intersection-complete neural codes on grids are convex
• Algebraic signatures of convex and non-convex codes
• Sparse neural codes and convexity
• Reverse-engineering of polynomial dynamical systems
• Convex Union Representability and Convex Codes
• Gröbner bases of neural ideals
• Strengthening Relationships between Neural Ideals and Receptive Fields
• An Algebraic Approach to Reverse Engineering Finite Dynamical Systems Arising from Biology
• What Makes a Neural Code Convex?

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