On the distribution of interspecies correlation for Markov models of character evolution on Yule trees

DOI10.1016/j.jtbi.2014.09.016zbMath1405.92200arXiv1403.4223OpenAlexW2071773807WikidataQ30854088 ScholiaQ30854088MaRDI QIDQ2413928

Forrest W. Crawford, Willem H. Mulder

Publication date: 17 September 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1403.4223

zbMATH Keywords

phylogeneticsYule processmutation modelinfinite sitesphylogenetic informativeness

Mathematics Subject Classification ID

Problems related to evolution (92D15) Diffusion processes (60J60) Applications of continuous-time Markov processes on discrete state spaces (60J28)

Related Items (5)

A consistent estimator of the evolutionary rate ⋮ Phylogenetic effective sample size ⋮ Probability distribution of tree age for the simple birth-death process, with applications to distributions of number of ancestral lineages and divergence times for pairs of taxa in a Yule tree ⋮ Phylogenetic confidence intervals for the optimal trait value ⋮ A Central Limit Theorem for punctuated equilibrium

Cites Work

• Unnamed Item
• Large sample approximations of probabilities of correct evolutionary tree estimation and biases of maximum likelihood estimation
• The expected length of pendant and interior edges of a Yule tree
• Stochastic properties of generalised Yule models, with biodiversity applications
• On incomplete sampling under birth-death models and connections to the sampling-based coalescent
• Probability distributions of ancestries and genealogical distances on stochastically generated rooted binary trees
• Sequence length bounds for resolving a deep phylogenetic divergence
• Quantifying the effects of anagenetic and cladogenetic evolution
• The mean and variance of the numbers of \(r\)-pronged nodes and \(r\)-caterpillars in Yule-generated genealogical trees
• Interspecies correlation for neutrally evolving traits
• Probability Models for DNA Sequence Evolution

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