Reverse-engineering of polynomial dynamical systems

DOI10.1016/j.aam.2006.08.004zbMath1129.93026arXivq-bio/0605032MaRDI QIDQ2467344

Abdul Salam Jarrah, Brandilyn Stigler, Michael Stillman, Reinhard C. Laubenbacher

Publication date: 21 January 2008

Published in: Advances in Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/q-bio/0605032

zbMATH Keywords

decomposition; monomial ideal; finite field; gene regulatory network; finite dynamical system; reverse-engineering

Mathematics Subject Classification ID

92B20: Neural networks for/in biological studies, artificial life and related topics

93C35: Multivariable systems, multidimensional control systems

13P10: Gröbner bases; other bases for ideals and modules (e.g., Janet and border bases)

Related Items

Algebraic Models and Their Use in Systems Biology, Inferring biologically relevant models: nested canalyzing functions, The neural ring: an algebraic tool for analyzing the intrinsic structure of neural codes, Parameter estimation for Boolean models of biological networks, Quantifier Elimination over Finite Fields Using Gröbner Bases

Uses Software

• Macaulay2

Cites Work

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