An improved algorithm for statistical alignment of sequences related by a star tree

DOI10.1006/BULM.2002.0300MaRDI QIDQ253274zbMATH OpenOpenAlexWikidataFDO

Authors István Miklós

Publication date 8 March 2016

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1006/bulm.2002.0300

zbMATH Keywords

algorithmalignmentinsertion-deletion modelstar tree

Mathematics Subject Classification ID

General biostatistics (92B15) Genetics and epigenetics (92D10) Software, source code, etc. for problems pertaining to biology (92-04)

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(5)

• Convergence rate estimation for the TKF91 model of biological sequence length evolution
• An Improved Model for Statistical Alignment
• A context dependent pair hidden Markov model for statistical alignment
• Gibbs sampler for statistical multiple alignment
• Trees, Stars, and Multiple Biological Sequence Alignment

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