Characteristics of promoter architecture-dependent expression noise and bursting kinetics

DOI10.1142/S0218127416500164MaRDI QIDQ2800702zbMATH OpenFDO

Authors Heli Tan, Zhanjiang Yuan, Jiajun Zhang, Tianshou Zhou

Publication date 18 April 2016

Published in International Journal of Bifurcation and Chaos in Applied Sciences and Engineering (Search for Journal in Brave)

zbMATH Keywords

transcription factorexpression noisegene modelpromoter architecturebursting kinetics

Mathematics Subject Classification ID

Genetics and epigenetics (92D10)

Recommendations

• Influence of complex promoter structure on gene expression
• Kinetic characteristics of transcriptional bursting in a complex gene model with cyclic promoter structure
• The nonlinear dynamics and fluctuations of mRNA levels in cross-talking pathway activated transcription
• Mathematical aspects of the regulation of gene transcription by promoters
• Fluctuations of mRNA distributions in multiple pathway activated transcription

Cites work

• scientific article; zbMATH DE number 3141417 (Why is no real title available?)
• Using gene expression noise to understand gene regulation

Cited in

(8)

• The nonlinear dynamics and fluctuations of mRNA levels in cross-talking pathway activated transcription
• Influence of complex promoter structure on gene expression
• Kinetic characteristics of transcriptional bursting in a complex gene model with cyclic promoter structure
• Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation
• Mathematical aspects of the regulation of gene transcription by promoters
• The dynamics of gene transcription Induced by variation in transcription kinetics
• The influence of nuclear compartmentalisation on stochastic dynamics of self-repressing gene expression
• Phase separation reduces cell-to-cell variability of transcriptional bursting

Describes a project that uses

Uses Software

• CplexA
• RegulonDB

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