Fluctuations of mRNA distributions in multiple pathway activated transcription

DOI10.3934/DCDSB.2018219MaRDI QIDQ2633637zbMATH OpenOpenAlexFDO

Authors Genghong Lin, Zhan Zhou, Qiwen Sun, Feng Jiao, Jianshe Yu

Publication date 9 May 2019

Published in Discrete and Continuous Dynamical Systems. Series B (Search for Journal in Brave)

Full work available at URL https://doi.org/10.3934/dcdsb.2018219

zbMATH Keywords

mean and second momentnoisenoise regulationnoise strengthoptimizationstochastic gene transcriptiontranscriptional efficiency

Mathematics Subject Classification ID

Cell biology (92C37) Biochemistry, molecular biology (92C40)

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Cites work

• Characteristics of mRNA dynamics in a multi-on model of stochastic transcription with regulation
• Distribution modes and their corresponding parameter regions in stochastic gene transcription
• Distribution profiles and their dynamic transition in stochastic gene transcription
• Gene expression noise is affected differentially by feedback in burst frequency and burst size
• Markovian modelling of gene product synthesis
• Modulation of first-passage time for bursty gene expression via random signals
• Modulation of gene transcription noise by competing transcription factors
• MONOTONIC DYNAMICS OF MRNA DEGRADATION BY TWO PATHWAYS
• Random dynamics of gene transcription activation in single cells
• Temporal profile of gene transcription noise modulated by cross-talking signal transduction pathways
• The dynamics of gene transcription in random environments
• The mean and noise of stochastic gene transcription
• The mean and noise of stochastic gene transcription with cell division
• The mean frequency of transcriptional bursting and its variation in single cells
• The nonlinear dynamics and fluctuations of mRNA levels in cross-talking pathway activated transcription
• Using gene expression noise to understand gene regulation

Cited in

(17)

• Multi-step regulation of transcription kinetics explains the non-linear relation between RNA polymerase II density and mrna expression in dosage compensation
• The dynamics of gene transcription in random environments
• The mean and noise of stochastic gene transcription
• On the existence of multiple solutions for a partial discrete Dirichlet boundary value problem with mean curvature operator
• Modulation of nuclear and cytoplasmic mRNA fluctuations by time-dependent stimuli: analytical distributions
• Three solutions to Dirichlet problems for second-order self-adjoint difference equations involving p-Laplacian
• Fluctuations in transcription factor binding can explain the graded and binary responses observed in inducible gene expression
• Microarrays and the relationship of mRNA variation to protein variation during the cell cycle
• Analytical formula and dynamic profile of mRNA distribution
• The nonlinear dynamics and fluctuations of mRNA levels in cross-talking pathway activated transcription
• Statistics of nascent and mature RNA fluctuations in a stochastic model of transcriptional initiation, elongation, pausing, and termination
• Characteristics of promoter architecture-dependent expression noise and bursting kinetics
• MONOTONIC DYNAMICS OF MRNA DEGRADATION BY TWO PATHWAYS
• Multiple Scenarios of Transition to Chaos in the Alternative Splicing Model
• Characteristics of mRNA dynamics in a multi-on model of stochastic transcription with regulation
• Coexistence of positive stationary states in finite lattice systems governed by discrete -Laplacian equations
• Dynamical regulation of mRNA distribution by cross-talking signaling pathways

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