Mesoscopic modeling of stochastic reaction-diffusion kinetics in the subdiffusive regime
From MaRDI portal
Publication:2806422
Abstract: Subdiffusion has been proposed as an explanation of various kinetic phenomena inside living cells. In order to fascilitate large-scale computational studies of subdiffusive chemical processes, we extend a recently suggested mesoscopic model of subdiffusion into an accurate and consistent reaction-subdiffusion computational framework. Two different possible models of chemical reaction are revealed and some basic dynamic properties are derived. In certain cases those mesoscopic models have a direct interpretation at the macroscopic level as fractional partial differential equations in a bounded time interval. Through analysis and numerical experiments we estimate the macroscopic effects of reactions under subdiffusive mixing. The models display properties observed also in experiments: for a short time interval the behavior of the diffusion and the reaction is ordinary, in an intermediate interval the behavior is anomalous, and at long times the behavior is ordinary again.
Recommendations
Cites work
- scientific article; zbMATH DE number 1642344 (Why is no real title available?)
- scientific article; zbMATH DE number 5907929 (Why is no real title available?)
- scientific article; zbMATH DE number 439383 (Why is no real title available?)
- scientific article; zbMATH DE number 3849611 (Why is no real title available?)
- scientific article; zbMATH DE number 3894826 (Why is no real title available?)
- scientific article; zbMATH DE number 236854 (Why is no real title available?)
- An implementation of Shor's \(r\)-algorithm
- Diffusive representation of pseudo-differential time-operators
- Efficient solution of a wave equation with fractional-order dissipative terms
- Exponential stabilization of Volterra integral equations with singular kernels
- From stochastic processes to numerical methods: a new scheme for solving reaction subdiffusion fractional partial differential equations
- Modeling subdiffusion using reaction diffusion systems
- Random walks on lattices. II
- Simulation of stochastic reaction-diffusion processes on unstructured meshes
- Solutions of ordinary differential equations as limits of pure jump markov processes
- Stochastic processes in physics and chemistry.
- The G and H Functions as Symmetrical Fourier Kernels
- The random walk's guide to anomalous diffusion: A fractional dynamics approach
- The role of dimerisation and nuclear transport in the Hes1 gene regulatory network
- Well-Posedness and Stabilizability of a Viscoelastic Equation in Energy Space
Cited in
(13)- Coupled mesoscopic and microscopic simulation of stochastic reaction-diffusion processes in mixed dimensions
- Subdiffusive Dynamics in Washboard Potentials: Two Different Approaches and Different Universality Classes
- Modeling subdiffusion using reaction diffusion systems
- Multiscale modeling of diffusion in a crowded environment
- Multiscale Simulation of Stochastic Reaction-Diffusion Networks
- Dynamical properties of subdiffusion in the bistable system with aperiodic inputs
- Encounter-based reaction-subdiffusion model I: surface adsorption and the local time propagator
- Stability and Strong Convergence for Spatial Stochastic Kinetics
- Effect of mesoscopic conservative phenomena in the dynamics of chemical reactions at the macroscopic scale
- Persistent random walk effect in the subdiffusion-reaction process
- A model for reversible reaction in a subdiffusive regime
- Bimolecular reactive transport in a two-dimensional velocity field in disordered media
- Fractional Euler limits and their applications
This page was built for publication: Mesoscopic modeling of stochastic reaction-diffusion kinetics in the subdiffusive regime
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2806422)
