Sorting by Transpositions Is Difficult
DOI10.1007/978-3-642-22006-7_55zbMath1334.68085arXiv1011.1157OpenAlexW1890701999MaRDI QIDQ3012840
Irena Rusu, Laurent Bulteau, Guillaume Fertin
Publication date: 6 July 2011
Published in: SIAM Journal on Discrete Mathematics, Automata, Languages and Programming (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/1011.1157
computational complexityNP-hardcomparative genomicssorting permutationsevolutionary distancetransposition distancetheoretical aspects of computational biologysorting by transpositions problem
Searching and sorting (68P10) Problems related to evolution (92D15) Combinatorics in computer science (68R05) Permutations, words, matrices (05A05) Biochemistry, molecular biology (92C40) Computational difficulty of problems (lower bounds, completeness, difficulty of approximation, etc.) (68Q17) Genetics and epigenetics (92D10)
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Cites Work
- Sorting permutations by block-interchanges
- Bounding prefix transposition distance for strings and permutations
- Pattern matching with address errors: rearrangement distances
- A simpler and faster 1.5-approximation algorithm for sorting by transpositions
- Sorting Strings by Reversals and by Transpositions
- Sorting by Transpositions Is Difficult
- A New and Faster Method of Sorting by Transpositions
- Edit Distances and Factorisations of Even Permutations
- Faster algorithms for sorting by transpositions and sorting by block interchanges
- Sorting by Transpositions
- Reversals and Transpositions Over Finite Alphabets
- Reversal Distance for Strings with Duplicates: Linear Time Approximation Using Hitting Set
- Sorting a bridge hand
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