Differential methylation tests of regulatory regions
DOI10.1515/SAGMB-2015-0037zbMATH Open1343.92019OpenAlexW2328326416WikidataQ39915601 ScholiaQ39915601MaRDI QIDQ306646FDOQ306646
Authors: Duchwan Ryu, Varghese George, Shaoyong Su, Huidong Shi, Robert H. Podolsky, Xiaoling Wang, Hongyan Xu
Publication date: 1 September 2016
Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1515/sagmb-2015-0037
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Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15) Biochemistry, molecular biology (92C40)
Cites Work
- Functional Data Analysis with R and MATLAB
- Ten Lectures on Wavelets
- Title not available (Why is that?)
- Title not available (Why is that?)
- The positive false discovery rate: A Bayesian interpretation and the \(q\)-value
- Wavelet-based Functional Mixed Models
- Singularity detection and processing with wavelets
- Wavelet-Based Nonparametric Modeling of Hierarchical Functions in Colon Carcinogenesis
- Using Wavelet-Based Functional Mixed Models to Characterize Population Heterogeneity in Accelerometer Profiles
- Title not available (Why is that?)
Cited In (3)
- Testing differentially methylated regions through functional principal component analysis
- Bayesian functional data analysis over dependent regions and its application for identification of differentially methylated regions
- Competitive signal discrimination, methylation reprogramming and genomic imprinting
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