Assessing genome-wide significance for the detection of differentially methylated regions
DOI10.1515/SAGMB-2017-0050zbMATH Open1420.92032OpenAlexW2891923099WikidataQ91543687 ScholiaQ91543687MaRDI QIDQ2324944FDOQ2324944
Authors: Christian M. Page, L. Vos, Trine B. Rounge, Hanne F. Harbo, Bettina K. Andreassen 
Publication date: 12 September 2019
Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)
Full work available at URL: http://hdl.handle.net/10852/68215
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- HMM-DM: identifying differentially methylated regions using a hidden Markov model
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Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)
Cites Work
- Sequential analysis. Tests and confidence intervals
- Probability approximations via the Poisson clumping heuristic
- The statistics of gene mapping
- False discovery rate for scanning statistics
- Scan statistics analysis for detection of introns in time-course tiling array data
- Selection-corrected statistical inference for region detection with high-throughput assays
Cited In (8)
- MethCP: differentially methylated region detection with change point models
- Correcting length-bias in gene set analysis for DNA methylation data
- Differential methylation tests of regulatory regions
- DMRScan
- HMM-DM: identifying differentially methylated regions using a hidden Markov model
- Covariate adjusted differential variability analysis of DNA methylation with propensity score method
- Competitive signal discrimination, methylation reprogramming and genomic imprinting
- An empirical Bayes approach for methylation differentiation at the single nucleotide resolution
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