Bootstrapping least-squares estimates in biochemical reaction networks

DOI10.1080/17513758.2015.1033022MaRDI QIDQ3304572zbMATH OpenOpenAlexWikidataFDO

Authors Daniel F. Linder, Grzegorz A. Rempala

Publication date 3 August 2020

Published in Journal of Biological Dynamics (Search for Journal in Brave)

Copyright license Creative Commons Attribution-NonCommercial 4.0 International

Full work available at URL https://doi.org/10.1080/17513758.2015.1033022

zbMATH Keywords

diffusion approximationleast-squares estimationreaction networkbootstrap Monte Carlo methoddensity-dependent Markov jump processnetwork reverse engineering

Mathematics Subject Classification ID

Bootstrap, jackknife and other resampling methods (62F40) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

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Cites work

• scientific article; zbMATH DE number 3567782 (Why is no real title available?)
• scientific article; zbMATH DE number 3806623 (Why is no real title available?)
• scientific article; zbMATH DE number 2237386 (Why is no real title available?)
• A stochastic model of gene transcription: an application to L1 retrotransposition events
• Asymptotic analysis of multiscale approximations to reaction networks
• Least squares estimation in stochastic biochemical networks
• Mathematical Statistics
• Nonlinear optimization.
• Regression Shrinkage and Selection via The Lasso: A Retrospective
• Regularization and Variable Selection Via the Elastic Net
• Stochastic epidemic models and their statistical analysis
• Stochastic modelling for systems biology.
• The EM Algorithm and Extensions, 2E

Cited in

(3)

• Parameter reconstruction for biochemical networks using interval analysis
• Utilization of the bootstrap method for determining confidence intervals of parameters for a model of MAP1B protein transport in axons
• Least squares estimation in stochastic biochemical networks

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