Bootstrapping least-squares estimates in biochemical reaction networks

DOI10.1080/17513758.2015.1033022zbMATH Open1448.92078OpenAlexW2021762874WikidataQ39926570 ScholiaQ39926570MaRDI QIDQ3304572FDOQ3304572

Authors: Daniel F. Linder, Grzegorz A. Rempala 

Publication date: 3 August 2020

Published in: Journal of Biological Dynamics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1080/17513758.2015.1033022

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zbMATH Keywords

diffusion approximationleast-squares estimationreaction networkbootstrap Monte Carlo methoddensity-dependent Markov jump processnetwork reverse engineering

Mathematics Subject Classification ID

Bootstrap, jackknife and other resampling methods (62F40) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

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• Asymptotic analysis of multiscale approximations to reaction networks
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• Least squares estimation in stochastic biochemical networks
• A stochastic model of gene transcription: an application to L1 retrotransposition events

Cited In (3)

• Parameter reconstruction for biochemical networks using interval analysis
• Utilization of the bootstrap method for determining confidence intervals of parameters for a model of MAP1B protein transport in axons
• Least squares estimation in stochastic biochemical networks

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