A stochastic model of gene transcription: an application to L1 retrotransposition events

DOI10.1016/J.JTBI.2006.02.010MaRDI QIDQ2201832zbMATH OpenOpenAlexWikidataFDO

Authors Kenneth S. Ramos, Ted Kalbfleisch, Grzegorz A. Rempala

Publication date 17 September 2020

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2006.02.010

zbMATH Keywords

Bayesian inferencechemical reaction kineticsgene transcription modelL-retrotransposonnorthern blotreaction constants estimationstochastic intracellular network

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45)

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Cited in

(11)

• Modelling co-transcriptional cleavage in the synthesis of yeast pre-rRNA
• Chemical master equation and Langevin regimes for a gene transcription model
• A generalized moment-based method for estimating parameters of stochastic gene transcription
• scientific article; zbMATH DE number 4055432 (Why is no real title available?)
• A two-scale mathematical model for DNA transcription
• Algebraic methods for inferring biochemical networks: a maximum likelihood approach
• Towards uncertainty quantification and inference in the stochastic SIR epidemic model
• scientific article; zbMATH DE number 559073 (Why is no real title available?)
• Bootstrapping least-squares estimates in biochemical reaction networks
• Modelling the translocation induction in sperms --- some general theories
• A probability model predicting initiation efficiency of retroviral vectors with two primer-binding sites

Describes a project that uses

Uses Software

• bootstrap
• R

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