Modeling gene-covariate interactions in sparse regression with group structure for genome-wide association studies

DOI10.1515/SAGMB-2014-0073zbMATH Open1329.92088OpenAlexW2156520722WikidataQ35878333 ScholiaQ35878333MaRDI QIDQ3465248FDOQ3465248

Authors: Yun Li, George T. O'Connor, Josée Dupuis, Eric D. Kolaczyk 

Publication date: 21 January 2016

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc4510949

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zbMATH Keywords

genome-wide association studiessparse regressiongene-environment/covariate interaction

Mathematics Subject Classification ID

General biostatistics (92B15) Genetics and epigenetics (92D10)

Cites Work

• The Adaptive Lasso and Its Oracle Properties
• Title not available (Why is that?)
• Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties
• Title not available (Why is that?)
• Bayesian variable selection with related predictors
• Variable selection with the strong heredity constraint and its oracle property
• Simultaneous analysis of Lasso and Dantzig selector
• The Dantzig selector: statistical estimation when \(p\) is much larger than \(n\). (With discussions and rejoinder).
• Sure Independence Screening for Ultrahigh Dimensional Feature Space
• Regularization and Variable Selection Via the Elastic Net
• Model Selection and Estimation in Regression with Grouped Variables
• The composite absolute penalties family for grouped and hierarchical variable selection
• Relaxed Lasso
• A group bridge approach for variable selection
• Group variable selection via a hierarchical lasso and its oracle property
• On the asymptotic properties of the group lasso estimator for linear models
• Variable selection using adaptive nonlinear interaction structures in high dimensions

Cited In (5)

• Ensemble sparse estimation of covariance structure for exploring genetic disease data
• Integrative sparse \(K\)-means with overlapping group Lasso in genomic applications for disease subtype discovery
• Group additive regression models for genomic data analysis
• Incorporating genetic heterogeneity in whole-genome regressions using interactions
• Of mice and men: sparse statistical modeling in cardiovascular genomics

Uses Software

• glmnet

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