Incorporating genetic heterogeneity in whole-genome regressions using interactions

DOI10.1007/S13253-015-0222-5zbMATH Open1329.62452OpenAlexW2163738892WikidataQ40218795 ScholiaQ40218795MaRDI QIDQ906068FDOQ906068

Authors Gustavo de los Campos, Yogasudha Veturi, Ana I. Vazquez, Christina Lehermeier, Paulino Pérez-Rodríguez

Publication date 29 January 2016

Published in Journal of Agricultural, Biological and Environmental Statistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s13253-015-0222-5

zbMATH Keywords

Bayesianpopulation structuregenomic predictiongenomic selectionmulti-breed analysis

Mathematics Subject Classification ID

Applications of statistics to environmental and related topics (62P12) Protein sequences, DNA sequences (92D20)

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Cites work

• Population structure and cryptic relatedness in genetic association studies
• The Bayesian Lasso

Cited in

(8)

• Imputing genotypes using regularized generalized linear regression models
• Joint genome-wide prediction in several populations accounting for randomness of genotypes: a hierarchical Bayes approach. II: Multivariate spike and slab priors for marker effects and derivation of approximate Bayes and fractional Bayes factors for the complete family of models
• Joint genome-wide prediction in several populations accounting for randomness of genotypes: a hierarchical Bayes approach. I: Multivariate Gaussian priors for marker effects and derivation of the joint probability mass function of genotypes
• Genomic selection method considering gene-to-gene interactions
• Group additive regression models for genomic data analysis
• Statistical and computational challenges in whole genome prediction and genome-wide association analyses for plant and animal breeding
• On the approximation of interaction effect models by Hadamard powers of the additive genomic relationship
• A Penalized Regression Framework for Building Polygenic Risk Models Based on Summary Statistics From Genome-Wide Association Studies and Incorporating External Information

Describes a project that uses

Uses Software

• PSMIX
• BGLR

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