Meta-analysis of functional neuroimaging data using Bayesian nonparametric binary regression

DOI10.1214/11-AOAS523zbMATH Open1243.62123OpenAlexW2125284947MaRDI QIDQ439162FDOQ439162

Authors Yu Ryan Yue, Martin A. Lindquist, Ji Meng Loh 

Publication date 1 August 2012

Published in The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1206.6674

zbMATH Keywords

Gaussian Markov random fieldsMarkov chain Monte Carlodata augmentationmeta-analysisbinary responsefMRIspatially adaptive smoothing

Mathematics Subject Classification ID

Bayesian inference (62F15) Nonparametric regression and quantile regression (62G08) Random fields; image analysis (62M40) Numerical analysis or methods applied to Markov chains (65C40) Neural biology (92C20) Biomedical imaging and signal processing (92C55)

Abstract: In this work we perform a meta-analysis of neuroimaging data, consisting of locations of peak activations identified in 162 separate studies on emotion. Neuroimaging meta-analyses are typically performed using kernel-based methods. However, these methods require the width of the kernel to be set a priori and to be constant across the brain. To address these issues, we propose a fully Bayesian nonparametric binary regression method to perform neuroimaging meta-analyses. In our method, each location (or voxel) has a probability of being a peak activation, and the corresponding probability function is based on a spatially adaptive Gaussian Markov random field (GMRF). We also include parameters in the model to robustify the procedure against miscoding of the voxel response. Posterior inference is implemented using efficient MCMC algorithms extended from those introduced in Holmes and Held [Bayesian Anal. 1 (2006) 145--168]. Our method allows the probability function to be locally adaptive with respect to the covariates, that is, to be smooth in one region of the covariate space and wiggly or even discontinuous in another. Posterior miscoding probabilities for each of the identified voxels can also be obtained, identifying voxels that may have been falsely classified as being activated. Simulation studies and application to the emotion neuroimaging data indicate that our method is superior to standard kernel-based methods.

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Cited In (8)

• Spatial Bayesian latent factor regression modeling of coordinate-based meta-analysis data
• Multiscale adaptive regression models for neuroimaging data
• Meta analysis of functional neuroimaging data via Bayesian spatial point processes
• Covariate-adjusted nonparametric analysis of magnetic resonance images using Markov chain Monte Carlo
• Bayesian models for functional magnetic resonance imaging data analysis
• Spatial Bayesian variable selection and grouping for high-dimensional scalar-on-image regression
• A Bayesian hierarchical spatial point process model for multi-type neuroimaging meta-analysis
• The coordinate-based meta-analysis of neuroimaging data

Uses Software

• GMRFLib

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