Sticky Hidden Markov Modeling of Comparative Genomic Hybridization

DOI10.1109/TSP.2010.2053033MaRDI QIDQ4570588zbMATH OpenOpenAlexFDO

Authors Lan Du, Minhua Chen, Joseph Lucas, Lawrence Carin

Publication date 9 July 2018

Published in IEEE Transactions on Signal Processing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1109/tsp.2010.2053033

Mathematics Subject Classification ID

Bayesian inference (62F15) Inference from stochastic processes (62M99) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

Cited in

(9)

• More nonparametric Bayesian inference in applications
• Efficient and effective learning of HMMs based on identification of hidden states
• A hidden Markov model to estimate homozygous-by-descent probabilities associated with nested layers of ancestors
• A hierarchical Bayesian model for inference of copy number variants and their association to gene expression
• Species sampling priors for modeling dependence: an application to the detection of chromosomal aberrations
• Bayesian Hidden Markov Modeling of Array CGH Data
• Generalized species sampling priors with latent beta reinforcements
• Algorithmic Learning Theory
• Class incremental learning with KL constraint and multi-strategy exemplar selection for classification based on MMFA model

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