Unified approach to partition functions of RNA secondary structures

DOI10.1007/S00285-013-0737-8zbMATH Open1337.92158OpenAlexW2100267962WikidataQ51146537 ScholiaQ51146537MaRDI QIDQ471074FDOQ471074

Authors: Ralf Bundschuh 

Publication date: 13 November 2014

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s00285-013-0737-8

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zbMATH Keywords

RNA foldingexact calculation of partition functionsmolten-native transitionRNA denaturation

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Classical equilibrium statistical mechanics (general) (82B05)

Cites Work

• Title not available (Why is that?)
• Random polymers and delocalization transitions
• Title not available (Why is that?)

Cited In (4)

• Parametric analysis of RNA branching configurations
• Theory and simulations for RNA folding in mixtures of monovalent and divalent cations
• RNA folding and large \(N\) matrix theory
• Thermodynamic Analysis of Interacting Nucleic Acid Strands

Uses Software

• Mfold
• Sfold
• KineFold

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