scientific article; zbMATH DE number 426426

MaRDI QIDQ3137288zbMATH OpenFDO

Authors

Publication date 9 March 1994

zbMATH Keywords

computer folding of RNA structuresconformational space of all possible RNA foldingsfolding ribonuclease P RNAfree energy landscapesmolecular biologyMonte Carlo methodreliability of structure predictions

Mathematics Subject Classification ID

Monte Carlo methods (65C05) Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40)

Recommendations

• Predicting RNA secondary structures with pseudoknots by MCMC sampling
• RNA secondary structures and their prediction
• On finding all suboptimal foldings of an RNA molecule
• RNA secondary structures: combinatorial models and folding algorithms
• scientific article; zbMATH DE number 4116366

Cited in

(17)

• Exploring the conformational space for protein folding with sequential Monte Carlo
• Self-similarity of rrna secondary structures: A clue to RNA folding
• RNA folding kinetics using Monte Carlo and Gillespie algorithms
• Folding of SAM-II riboswitch explored by replica-exchange molecular dynamics simulation
• Computer analysis of structurization processes of nucleic acids
• Computational Challenges and Opportunities in the Design of Unconventional Machines from Nucleic Acids
• scientific article; zbMATH DE number 3943610 (Why is no real title available?)
• Unified approach to partition functions of RNA secondary structures
• scientific article; zbMATH DE number 4116367 (Why is no real title available?)
• The statistical mechanics of kinetically‐controlled RNA folding pathways
• Loops MC: an all-atom Monte Carlo simulation program for RNAs based on inverse kinematic loop closure
• Theory and simulations for RNA folding in mixtures of monovalent and divalent cations
• Large-N random matrices for RNA folding
• Random matrix theory and RNA folding
• Arrhenius lifetimes of RNA structures from free energy landscapes
• Low‐Resolution Molecular Dynamics Simulations of the 30S Ribosomal Subunit
• A motion planning approach to studying molecular motions

This page was built for publication:

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3137288)