Analytic Solutions for Three-Taxon MLMC Trees with Variable Rates Across Sites

DOI10.1007/3-540-44696-6_16zbMATH Open1129.92316OpenAlexW1517182104MaRDI QIDQ4801154FDOQ4801154

Authors: Benny Chor, David Penny, M. D. Hendy 

Publication date: 6 April 2003

Published in: Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/3-540-44696-6_16

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Mathematics Subject Classification ID

Statistical aspects of information-theoretic topics (62B10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) Trees (05C05)

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• New heuristics for rooted triplet consistency
• Analytic solutions for three taxon ML trees with variable rates across sites
• Maximum likelihood estimation for unrooted 3-leaf trees: an analytic solution for the CFN model
• Analytic solutions of maximum likelihood on forks of four taxa
• Inferring a level-1 phylogenetic network from a dense set of rooted triplets

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