Quantifying uncertainty in parameter estimates for stochastic models of collective cell spreading using approximate Bayesian computation
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Cites work
- A continuum approximation to an off-lattice individual-cell based model of cell migration and adhesion
- Bayesian experimental design for models with intractable likelihoods
- Bayesian inference and the parametric bootstrap
- Constructing summary statistics for approximate Bayesian computation: semi-automatic approximate Bayesian computation. With discussion and authors' reply
- Discrete and continuous models for tissue growth and shrinkage
- Estimation of parameters for macroparasite population evolution using approximate Bayesian computation
- Inference for Stereological Extremes
- Integrating approximate Bayesian computation with complex agent-based models for cancer research
- Markov chain Monte Carlo: can we trust the third significant figure?
- Mathematical biology. Vol. 1: An introduction.
- Mathematical modeling of corneal epithelial wound healing
- Multi-scale modeling of a wound-healing cell migration assay
- Quantifying glioma cell growth and invasion in vitro
- Quantifying intrinsic and extrinsic noise in gene transcription using the linear noise approximation: an application to single cell data
- Sequential Monte Carlo without likelihoods
Cited in
(24)- Extended logistic growth model for heterogeneous populations
- Parameter Estimation in an SPDE Model for Cell Repolarization
- Continuum descriptions of spatial spreading for heterogeneous cell populations: theory and experiment
- Reliable and efficient parameter estimation using approximate continuum limit descriptions of stochastic models
- Revisiting the Fisher-Kolmogorov-Petrovsky-Piskunov equation to interpret the spreading-extinction dichotomy
- Inferring parameters for a lattice-free model of cell migration and proliferation using experimental data
- Critical length for the spreading-vanishing dichotomy in higher dimensions
- An approximate likelihood perspective on ABC methods
- Reproducibility of scratch assays is affected by the initial degree of confluence: experiments, modelling and model selection
- Rejoinder
- Approximate Bayesian computation reveals the importance of repeated measurements for parameterising cell-based models of growing tissues
- A Bayesian computational approach to explore the optimal duration of a cell proliferation assay
- An approximate Bayesian computation approach for embryonic astrocyte migration model reduction
- Multilevel rejection sampling for approximate Bayesian computation
- Calibration of agent based models for monophasic and biphasic tumour growth using approximate Bayesian computation
- Bayesian Synthetic Likelihood
- Rapid Bayesian Inference for Expensive Stochastic Models
- Bayesian inference of agent-based models: a tool for studying kidney branching morphogenesis
- Using experimental data and information criteria to guide model selection for reaction-diffusion problems in mathematical biology
- Logistic proliferation of cells in scratch assays is delayed
- Spectral density-based and measure-preserving ABC for partially observed diffusion processes. An illustration on Hamiltonian SDEs
- Bayesian parametric bootstrap for models with intractable likelihoods
- Efficient Bayesian Synthetic Likelihood With Whitening Transformations
- Sequential Bayesian experimental design for implicit models via mutual information
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