Building oscillatory chemical reaction networks by adding reversible reactions

DOI10.1137/19M1270975zbMATH Open1448.80015arXiv1906.09070OpenAlexW3171709669MaRDI QIDQ5117974FDOQ5117974

Authors: Murad Banaji 

Publication date: 26 August 2020

Published in: SIAM Journal on Applied Mathematics (Search for Journal in Brave)

Abstract: We show that if a chemical reaction network (CRN) admits nondegenerate (resp., linearly stable) oscillation, and we add new reversible reactions involving new species to this CRN, then the new CRN so created also admits nondegenerate (resp., linearly stable) oscillation provided certain mild and easily checked conditions are met. This claim that the larger CRN "inherits" oscillation from the smaller one, provided it is built from the smaller CRN in an appropriate way, follows an analogous result involving multistationarity. It also adds to a number of prior results on the inheritance of oscillation; these collectively often allow us to determine the capacity of a given network for oscillation based on an analysis of its subnetworks.

Full work available at URL: https://arxiv.org/abs/1906.09070

Recommendations

• Inheritance of oscillation in chemical reaction networks
• Adding species to chemical reaction networks: preserving rank preserves nondegenerate behaviours
• The inheritance of nondegenerate multistationarity in chemical reaction networks
• Addition of flow reactions preserving multistationarity and bistability
• Oscillations in non-mass action kinetics models of biochemical reaction networks arising from pairs of subnetworks

zbMATH Keywords

oscillationchemical reaction networksinheritancesingular perturbation theorymass action kinetics

Mathematics Subject Classification ID

Generic properties, structural stability of dynamical systems (37C20) Periodic orbits of vector fields and flows (37C27) Chemical kinetics in thermodynamics and heat transfer (80A30) Singular perturbations of ordinary differential equations (34D15)

Cites Work

• Geometric singular perturbation theory for ordinary differential equations
• Toric ideals and graph theory to analyze Hopf bifurcations in mass action systems
• Combinatorial approaches to Hopf bifurcations in systems of interacting elements
• Graph-theoretic methods for the analysis of chemical and biochemical networks. I. Multistability and oscillations in ordinary differential equation models
• Graph-theoretic characterizations of monotonicity of chemical networks in reaction coordinates
• Title not available (Why is that?)
• Some results on injectivity and multistationarity in chemical reaction networks
• Local and global stability of equilibria for a class of chemical reaction networks
• Detection of Hopf bifurcations in chemical reaction networks using convex coordinates
• Bistability and oscillations in chemical reaction networks
• Monotonicity in chemical reaction systems
• Atoms of multistationarity in chemical reaction networks
• Power-law kinetics and determinant criteria for the preclusion of multistationarity in networks of interacting species
• The Inheritance of Nondegenerate Multistationarity in Chemical Reaction Networks
• Which Small Reaction Networks Are Multistationary?
• Inheritance of oscillation in chemical reaction networks
• Complete characterization by multistationarity of fully open networks with one non-flow reaction

Cited In (4)

• Title not available (Why is that?)
• Splitting Reactions Preserves Nondegenerate Behaviors in Chemical Reaction Networks
• Adding species to chemical reaction networks: preserving rank preserves nondegenerate behaviours
• Algebra, geometry and topology of ERK kinetics

This page was built for publication: Building oscillatory chemical reaction networks by adding reversible reactions

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5117974)