Prediction in cancer genomics using topological signatures and machine learning
DOI10.1007/978-3-030-43408-3_10zbMATH Open1448.62165OpenAlexW3038125657MaRDI QIDQ5118370FDOQ5118370
Authors: Georgina Gonzalez, Arina Ushakova, R. Sazdanović, J. Arsuaga 
Publication date: 8 September 2020
Published in: Topological Data Analysis (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/978-3-030-43408-3_10
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Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Inference from stochastic processes and prediction (62M20) Protein sequences, DNA sequences (92D20) Persistent homology and applications, topological data analysis (55N31) Topological data analysis (62R40)
Cites Work
- Persistent homology -- a survey
- The Group Lasso for Logistic Regression
- Hidden Markov models approach to the analysis of array CGH data
- Statistical topological data analysis using persistence landscapes
- Morse theory for filtrations and efficient computation of persistent homology
- Applications of computational homology to the analysis of treatment response in breast cancer patients
- Simplicial models and topological inference in biological systems
Cited In (5)
- Learning Oncogenic Pathways from Binary Genomic Instability Data
- Topological analysis of gene expression arrays identifies high risk molecular subtypes in breast cancer
- What Are Higher-Order Networks?
- Multi-target QPDR classification model for human breast and colon cancer-related proteins using star graph topological indices
- Prediction of metastasis in advanced colorectal carcinomas using CGH data
Uses Software
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